RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 SALL1Q9NSC2 1324 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
UBR1-210ENST00000569337 CACNB3P54284 484 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 LDLRAD1Q5T700 205 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
UBR1-210ENST00000569337 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
UBR1-210ENST00000569337 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
UBR1-210ENST00000569337 FZD1Q9UP38 647 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
UBR1-210ENST00000569337 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 PDE4AP27815 886 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 MAP3K11Q16584 847 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 CCDC158Q5M9N0 1113 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 FKBP1CQ5VVH2 108 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 DZIP1Q86YF9 867 aaKnown RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 CSRNP1Q96S65 589 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
UBR1-210ENST00000569337 PDS5AQ29RF7 1337 aaKnown RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
UBR1-210ENST00000569337 PAPPA2Q9BXP8 1791 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
UBR1-210ENST00000569337 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
UBR1-210ENST00000569337 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 SPATA5Q8NB90 893 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 TEPSINQ96N21 525 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 CCDC8Q9H0W5 538 aaPredicted RBP11.47□□□□□ -0.57
UBR1-210ENST00000569337 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
UBR1-210ENST00000569337 SALL3Q9BXA9 1300 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 TRPA1O75762 1119 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
UBR1-210ENST00000569337 CDC42EP5Q6NZY7 148 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 PI16Q6UXB8 463 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 AACSQ86V21 672 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 ANKRD13AQ8IZ07 590 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 HOOK2Q96ED9 719 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 USP40Q9NVE5 1235 aa11.46□□□□□ -0.57
UBR1-210ENST00000569337 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
UBR1-210ENST00000569337 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 MCAMP43121 646 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 MECOMQ03112 1051 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 CLASRPQ8N2M8 674 aaKnown RBP11.45□□□□□ -0.58
UBR1-210ENST00000569337 FAM151AQ8WW52 585 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
UBR1-210ENST00000569337 CLMNQ96JQ2 1002 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 SAGE1Q9NXZ1 904 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 LRP2BPQ9P2M1 347 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 SSC5DA1L4H1 1573 aa11.45□□□□□ -0.58
UBR1-210ENST00000569337 MYO5AQ9Y4I1 1855 aaKnown RBP11.44□□□□□ -0.58
UBR1-210ENST00000569337 LDHCP07864 332 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 GSTO1P78417 241 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 SREBF2Q12772 1141 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 TCP10Q12799 353 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 TSHZ3Q63HK5 1081 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 ZNF512BQ96KM6 892 aaPredicted RBP11.44□□□□□ -0.58
UBR1-210ENST00000569337 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
UBR1-210ENST00000569337 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 GAKO14976 1311 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 MANSC4A6NHS7 340 aaPredicted RBP11.43□□□□□ -0.58
UBR1-210ENST00000569337 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
UBR1-210ENST00000569337 ZBTB48P10074 688 aaPredicted RBP11.43□□□□□ -0.58
UBR1-210ENST00000569337 BTDP43251 543 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 TM4SF4P48230 202 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 INHBEP58166 350 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 NFIAQ12857 509 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 DCAF15Q66K64 600 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 CSADQ9Y600 493 aa11.43□□□□□ -0.58
UBR1-210ENST00000569337 GPR75-ASB3A0A0A6YYF3 556 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 ZAP70P43403 619 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.42□□□□□ -0.58
UBR1-210ENST00000569337 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms