RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CELF2-AS1Q8N7Q2 184 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 GPBAR1Q8TDU6 330 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 FERD3LQ96RJ6 166 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 ANTXR1Q9H6X2 564 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 CDK11AQ9UQ88 783 aaPredicted RBP8.66□□□□□ -1.02
UBR1-208ENST00000569066 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 ALAS2P22557 587 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
UBR1-208ENST00000569066 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
UBR1-208ENST00000569066 K7ELQ4 463 aaPredicted RBP8.65□□□□□ -1.02
UBR1-208ENST00000569066 INPP5AQ14642 412 aa8.65□□□□□ -1.02
UBR1-208ENST00000569066 KLHDC7BQ96G42 594 aa8.65□□□□□ -1.02
UBR1-208ENST00000569066 SHISA8B8ZZ34 492 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 ADAMTS2O95450 1211 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 BPNT1O95861 308 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 COL9A2Q14055 689 aaPredicted RBP8.65□□□□□ -1.03
UBR1-208ENST00000569066 RUFY4Q6ZNE9 571 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.03
UBR1-208ENST00000569066 CCDC84Q86UT8 332 aaPredicted RBP8.65□□□□□ -1.03
UBR1-208ENST00000569066 TTC9Q92623 222 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 CCDC86Q9H6F5 360 aaKnown RBP8.65□□□□□ -1.03
UBR1-208ENST00000569066 STRIP2Q9ULQ0 834 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 PCDHB14Q9Y5E9 798 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 CORINQ9Y5Q5 1042 aa8.65□□□□□ -1.03
UBR1-208ENST00000569066 TM4SF5O14894 197 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 FSCN2O14926 492 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
UBR1-208ENST00000569066 MAOBP27338 520 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 NLRP12P59046 1061 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 RAB33AQ14088 237 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 LRRC14Q15048 493 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 GALNT11Q8NCW6 608 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 TNKS2Q9H2K2 1166 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 PRKAG3Q9UGI9 489 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 TBX22Q9Y458 520 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 CADPSQ9ULU8 1353 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 LILRB5O75023 590 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 DLGAP3O95886 979 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 TRIM55Q9BYV6 548 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 GDF2Q9UK05 429 aaPredicted RBP8.64□□□□□ -1.03
UBR1-208ENST00000569066 ZNRF3Q9ULT6 936 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 PCDHA4Q9UN74 947 aa8.64□□□□□ -1.03
UBR1-208ENST00000569066 MRPL42Q9Y6G3 142 aaKnown RBP8.64□□□□□ -1.03
UBR1-208ENST00000569066 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
UBR1-208ENST00000569066 SRSF11Q05519 484 aaKnown RBP8.63□□□□□ -1.03
UBR1-208ENST00000569066 C19orf57Q0VDD7 668 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
UBR1-208ENST00000569066 MICAL1Q8TDZ2 1067 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 PLPPR2Q96GM1 343 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 FAM221BA6H8Z2 402 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 ADAM11O75078 769 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
UBR1-208ENST00000569066 AP3B2Q13367 1082 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 LSRQ86X29 649 aaPredicted RBP8.63□□□□□ -1.03
UBR1-208ENST00000569066 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 CACNA2D2Q9NY47 1150 aa8.63□□□□□ -1.03
UBR1-208ENST00000569066 ROBO2Q9HCK4 1378 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 GIPRP48546 466 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 ZNF746Q6NUN9 644 aaPredicted RBP8.62□□□□□ -1.03
UBR1-208ENST00000569066 LRFN4Q6PJG9 635 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 SRPK1Q96SB4 655 aaKnown RBP8.62□□□□□ -1.03
UBR1-208ENST00000569066 EMILIN2Q9BXX0 1053 aa8.62□□□□□ -1.03
UBR1-208ENST00000569066 ZNF862O60290 1169 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 TRIM37O94972 964 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 ZNF165P49910 485 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 SETDB1Q15047 1291 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 USP26Q9BXU7 913 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
UBR1-208ENST00000569066 TLDC2A0PJX2 215 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
UBR1-208ENST00000569066 LIG1P18858 919 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 COL9A3Q14050 684 aaPredicted RBP8.61□□□□□ -1.03
UBR1-208ENST00000569066 RASA3Q14644 834 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 POU4F3Q15319 338 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 MSL1Q68DK7 614 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 DMRTC2Q8IXT2 367 aaPredicted RBP8.61□□□□□ -1.03
UBR1-208ENST00000569066 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
UBR1-208ENST00000569066 SNTG2Q9NY99 539 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 CSADQ9Y600 493 aa8.61□□□□□ -1.03
UBR1-208ENST00000569066 DNAJA2O60884 412 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 KCNK4Q9NYG8 393 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 GFRA2O00451 464 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 PDE3AQ14432 1141 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 REXO1Q8N1G1 1221 aaKnown RBP8.6□□□□□ -1.03
UBR1-208ENST00000569066 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
UBR1-208ENST00000569066 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
UBR1-208ENST00000569066 CYP11A1P05108 521 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms