RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
CNOT1-215ENST00000569020 ARHGEF6Q15052 776 aa17■□□□□ 0.31
CNOT1-215ENST00000569020 FAM151AQ8WW52 585 aa17■□□□□ 0.31
CNOT1-215ENST00000569020 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
CNOT1-215ENST00000569020 LRRFIP2Q9Y608 721 aaKnown RBP17■□□□□ 0.31
CNOT1-215ENST00000569020 SNCAIPQ9Y6H5 919 aa17■□□□□ 0.31
CNOT1-215ENST00000569020 SEMA3EO15041 775 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
CNOT1-215ENST00000569020 CETPP11597 493 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 PRPF38BQ5VTL8 546 aaKnown RBP16.99■□□□□ 0.31
CNOT1-215ENST00000569020 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
CNOT1-215ENST00000569020 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
CNOT1-215ENST00000569020 PRDX5P30044 214 aa16.98■□□□□ 0.31
CNOT1-215ENST00000569020 SNAPC2Q13487 334 aa16.98■□□□□ 0.31
CNOT1-215ENST00000569020 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
CNOT1-215ENST00000569020 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
CNOT1-215ENST00000569020 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 IRF6O14896 467 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 PPATQ06203 517 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 TCP10Q12799 353 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 PPIL2Q13356 520 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
CNOT1-215ENST00000569020 MEIS3Q99687 375 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CNOT1-215ENST00000569020 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
CNOT1-215ENST00000569020 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
CNOT1-215ENST00000569020 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
CNOT1-215ENST00000569020 PHKA1P46020 1223 aa16.96■□□□□ 0.31
CNOT1-215ENST00000569020 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
CNOT1-215ENST00000569020 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
CNOT1-215ENST00000569020 USP40Q9NVE5 1235 aa16.96■□□□□ 0.31
CNOT1-215ENST00000569020 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
CNOT1-215ENST00000569020 TLR2O60603 784 aa16.95■□□□□ 0.3
CNOT1-215ENST00000569020 GNAI3P08754 354 aa16.95■□□□□ 0.3
CNOT1-215ENST00000569020 KIF22Q14807 665 aa16.95■□□□□ 0.3
CNOT1-215ENST00000569020 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
CNOT1-215ENST00000569020 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 ZBTB22O15209 634 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 INPP5BP32019 993 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 CAP1Q01518 475 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 NFIAQ12857 509 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 ARMC5Q96C12 935 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 ZNF112Q9UJU3 913 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
CNOT1-215ENST00000569020 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 ADORA1P30542 326 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 SLF2Q8IX21 1173 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
CNOT1-215ENST00000569020 TMEM106CQ9BVX2 250 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 FAM198AQ9UFP1 575 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
CNOT1-215ENST00000569020 A0A1B0GUL7 405 aa16.92■□□□□ 0.3
CNOT1-215ENST00000569020 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
CNOT1-215ENST00000569020 TIMM10P62072 90 aa16.92■□□□□ 0.3
CNOT1-215ENST00000569020 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
CNOT1-215ENST00000569020 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
CNOT1-215ENST00000569020 DZIP1Q86YF9 867 aaKnown RBP16.92■□□□□ 0.3
CNOT1-215ENST00000569020 PTCH2Q9Y6C5 1203 aa16.92■□□□□ 0.3
CNOT1-215ENST00000569020 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
CNOT1-215ENST00000569020 GNRH1P01148 92 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
CNOT1-215ENST00000569020 MTX1Q13505 466 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
CNOT1-215ENST00000569020 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
CNOT1-215ENST00000569020 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 KCNH4Q9UQ05 1017 aa16.91■□□□□ 0.3
CNOT1-215ENST00000569020 ENTPD3O75355 529 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 RGS3P49796 1198 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 TFCP2Q12800 502 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
CNOT1-215ENST00000569020 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 ZNF333Q96JL9 665 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 GAKO14976 1311 aa16.9■□□□□ 0.3
CNOT1-215ENST00000569020 MGAMO43451 1857 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 PDHXO00330 501 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 ZFPM1Q8IX07 1006 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
CNOT1-215ENST00000569020 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
CNOT1-215ENST00000569020 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 ARHGAP39Q9C0H5 1083 aa16.89■□□□□ 0.29
CNOT1-215ENST00000569020 GNAI2P04899 355 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 TRIM27P14373 513 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
CNOT1-215ENST00000569020 BTDP43251 543 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 PRMT2P55345 433 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 CPA4Q9UI42 421 aa16.88■□□□□ 0.29
CNOT1-215ENST00000569020 PTPRFP10586 1907 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms