RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 MAP3K11Q16584 847 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 DZIP1LQ8IYY4 767 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 PTPN18Q99952 460 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 TMEM39BQ9GZU3 492 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 USP44Q9H0E7 712 aa12.35□□□□□ -0.43
TNRC6A-215ENST00000568903 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-215ENST00000568903 CRKP46108 304 aa12.34□□□□□ -0.43
TNRC6A-215ENST00000568903 FOXK1P85037 733 aa12.34□□□□□ -0.43
TNRC6A-215ENST00000568903 SREBF2Q12772 1141 aa12.34□□□□□ -0.43
TNRC6A-215ENST00000568903 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
TNRC6A-215ENST00000568903 MYO1BO43795 1136 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 FKTNO75072 461 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 DSG2Q14126 1118 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 COL1A1P02452 1464 aaPredicted RBP12.33□□□□□ -0.44
TNRC6A-215ENST00000568903 PDE8BO95263 885 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 CFHR5Q9BXR6 569 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 ECM29Q5VYK3 1845 aa12.32□□□□□ -0.44
TNRC6A-215ENST00000568903 BRCA2P51587 3418 aa12.31□□□□□ -0.44
TNRC6A-215ENST00000568903 MANSC4A6NHS7 340 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-215ENST00000568903 CRHR2Q13324 411 aa12.31□□□□□ -0.44
TNRC6A-215ENST00000568903 VPS37DQ86XT2 251 aa12.31□□□□□ -0.44
TNRC6A-215ENST00000568903 OPTNQ96CV9 577 aa12.31□□□□□ -0.44
TNRC6A-215ENST00000568903 SLC34A2O95436 690 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 ZBTB48P10074 688 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 FGFR2P21802 821 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 IREB2P48200 963 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 VGLL4Q14135 290 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 NOM1Q5C9Z4 860 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 CD99L2Q8TCZ2 262 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
TNRC6A-215ENST00000568903 OTOFQ9HC10 1997 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 SPDYE16A6NNV3 312 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 E9PSI1 815 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 FRAT2O75474 233 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 SEC24BO95487 1268 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 PKN2Q16513 984 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 ATG9AQ7Z3C6 839 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 PTPRCP08575 1304 aa12.29□□□□□ -0.44
TNRC6A-215ENST00000568903 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 EYA2O00167 538 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 INHBEP58166 350 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 CAVIN4Q5BKX8 364 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 ZKSCAN4Q969J2 545 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 SIL1Q9H173 461 aa12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-215ENST00000568903 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 MIGA2Q7L4E1 593 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 TRMT2AQ8IZ69 625 aaKnown RBP12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 SMC4Q9NTJ3 1288 aa12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.45
TNRC6A-215ENST00000568903 ARAP2Q8WZ64 1704 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 CCL15-CCL14A0A0B4J2E2 113 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 SLURP2P0DP57 97 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 CCL15Q16663 113 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 SNCAIPQ9Y6H5 919 aa12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
TNRC6A-215ENST00000568903 UNCXA6NJT0 531 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 DPYSL4O14531 572 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 PRDX5P30044 214 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 ADORA1P30542 326 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 HDLBPQ00341 1268 aaKnown RBP12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 TCP10Q12799 353 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 NFIAQ12857 509 aa12.25□□□□□ -0.45
TNRC6A-215ENST00000568903 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms