RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PDE8BO95263 885 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 CYP2C8P10632 490 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 OSBPP22059 807 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 PSMC4P43686 418 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 C17orf99Q6UX52 265 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 UTYO14607 1347 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 ADGRA2Q96PE1 1338 aa18.7■□□□□ 0.58
USB1-214ENST00000568848 FGFR2P21802 821 aa18.69■□□□□ 0.58
USB1-214ENST00000568848 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
USB1-214ENST00000568848 MRPL50Q8N5N7 158 aaKnown RBP18.69■□□□□ 0.58
USB1-214ENST00000568848 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
USB1-214ENST00000568848 DAGLAQ9Y4D2 1042 aa18.69■□□□□ 0.58
USB1-214ENST00000568848 PRDX5P30044 214 aa18.68■□□□□ 0.58
USB1-214ENST00000568848 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
USB1-214ENST00000568848 KIF22Q14807 665 aa18.68■□□□□ 0.58
USB1-214ENST00000568848 CCDC84Q86UT8 332 aaPredicted RBP18.68■□□□□ 0.58
USB1-214ENST00000568848 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
USB1-214ENST00000568848 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
USB1-214ENST00000568848 FAM198AQ9UFP1 575 aa18.68■□□□□ 0.58
USB1-214ENST00000568848 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
USB1-214ENST00000568848 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
USB1-214ENST00000568848 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
USB1-214ENST00000568848 PRKCZQ05513 592 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 DPF3Q92784 378 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 SIL1Q9H173 461 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 LAMA3Q16787 3333 aa18.67■□□□□ 0.58
USB1-214ENST00000568848 CCL5P13501 91 aa18.66■□□□□ 0.58
USB1-214ENST00000568848 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
USB1-214ENST00000568848 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
USB1-214ENST00000568848 GPAT2Q6NUI2 795 aa18.66■□□□□ 0.58
USB1-214ENST00000568848 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
USB1-214ENST00000568848 PPATQ06203 517 aa18.65■□□□□ 0.58
USB1-214ENST00000568848 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
USB1-214ENST00000568848 RAET1EQ8TD07 263 aa18.65■□□□□ 0.58
USB1-214ENST00000568848 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
USB1-214ENST00000568848 RPAP1Q9BWH6 1393 aaPredicted RBP18.65■□□□□ 0.58
USB1-214ENST00000568848 MGAMO43451 1857 aa18.65■□□□□ 0.58
USB1-214ENST00000568848 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
USB1-214ENST00000568848 ELNP15502 786 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 GRK4P32298 578 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
USB1-214ENST00000568848 HHIPL2Q6UWX4 724 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 ATG9AQ7Z3C6 839 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 USP40Q9NVE5 1235 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
USB1-214ENST00000568848 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
USB1-214ENST00000568848 EYA2O00167 538 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 ADORA1P30542 326 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 SH3BP5LQ7L8J4 393 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 ZNF112Q9UJU3 913 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
USB1-214ENST00000568848 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
USB1-214ENST00000568848 SLC5A1P13866 664 aa18.62■□□□□ 0.57
USB1-214ENST00000568848 ZEB1P37275 1124 aaPredicted RBP18.62■□□□□ 0.57
USB1-214ENST00000568848 PHKA1P46020 1223 aa18.62■□□□□ 0.57
USB1-214ENST00000568848 FKBP1CQ5VVH2 108 aa18.62■□□□□ 0.57
USB1-214ENST00000568848 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
USB1-214ENST00000568848 ZCCHC17Q9NP64 241 aaKnown RBP18.62■□□□□ 0.57
USB1-214ENST00000568848 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
USB1-214ENST00000568848 ATRNL1Q5VV63 1379 aa18.62■□□□□ 0.57
USB1-214ENST00000568848 MAST3O60307 1309 aa18.61■□□□□ 0.57
USB1-214ENST00000568848 BCRP11274 1271 aa18.61■□□□□ 0.57
USB1-214ENST00000568848 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
USB1-214ENST00000568848 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 GJA8P48165 433 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 RGS3P49796 1198 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 MRIQ9BWK5 157 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 MYH2Q9UKX2 1941 aa18.6■□□□□ 0.57
USB1-214ENST00000568848 PTPRFP10586 1907 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 PHF20L1A8MW92 1017 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 SOX1O00570 391 aaPredicted RBP18.59■□□□□ 0.57
USB1-214ENST00000568848 ANP32CO43423 234 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 NOL9Q5SY16 702 aaKnown RBP18.59■□□□□ 0.57
USB1-214ENST00000568848 WDR66Q8TBY9 1149 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
USB1-214ENST00000568848 LPIN2Q92539 896 aa18.59■□□□□ 0.57
USB1-214ENST00000568848 DDX4Q9NQI0 724 aaKnown RBP18.59■□□□□ 0.57
USB1-214ENST00000568848 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
USB1-214ENST00000568848 COL6A3P12111 3177 aa18.58■□□□□ 0.57
USB1-214ENST00000568848 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.56
USB1-214ENST00000568848 FARP2O94887 1054 aaPredicted RBP18.58■□□□□ 0.56
USB1-214ENST00000568848 GJB1P08034 283 aa18.58■□□□□ 0.56
USB1-214ENST00000568848 PICALMQ13492 652 aa18.58■□□□□ 0.56
USB1-214ENST00000568848 ATP2B3Q16720 1220 aa18.58■□□□□ 0.56
USB1-214ENST00000568848 HOOK2Q96ED9 719 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms