RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 FKBP1CQ5VVH2 108 aa19.4■□□□□ 0.7
NME3-211ENST00000568561 MRIQ9BWK5 157 aa19.4■□□□□ 0.7
NME3-211ENST00000568561 SUGT1Q9Y2Z0 365 aa19.4■□□□□ 0.7
NME3-211ENST00000568561 DAGLAQ9Y4D2 1042 aa19.4■□□□□ 0.7
NME3-211ENST00000568561 MYH2Q9UKX2 1941 aa19.39■□□□□ 0.7
NME3-211ENST00000568561 CETPP11597 493 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 PRDX5P30044 214 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 TCP10Q12799 353 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 NFIAQ12857 509 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 ATP2B3Q16720 1220 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 DCAF15Q66K64 600 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 WDR66Q8TBY9 1149 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 CEP290O15078 2479 aa19.39■□□□□ 0.69
NME3-211ENST00000568561 UBTFL1P0CB47 393 aaPredicted RBP19.38■□□□□ 0.69
NME3-211ENST00000568561 PPIL2Q13356 520 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 SNAPC2Q13487 334 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 CDC42EP5Q6NZY7 148 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 HOOK2Q96ED9 719 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 ZNF333Q96JL9 665 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 ZNF341Q9BYN7 854 aa19.38■□□□□ 0.69
NME3-211ENST00000568561 SLC9C1Q4G0N8 1177 aa19.37■□□□□ 0.69
NME3-211ENST00000568561 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
NME3-211ENST00000568561 FAM151AQ8WW52 585 aa19.37■□□□□ 0.69
NME3-211ENST00000568561 PA2G4Q9UQ80 394 aaKnown RBP19.37■□□□□ 0.69
NME3-211ENST00000568561 TLR2O60603 784 aa19.36■□□□□ 0.69
NME3-211ENST00000568561 PHKA1P46020 1223 aa19.36■□□□□ 0.69
NME3-211ENST00000568561 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
NME3-211ENST00000568561 LRRFIP2Q9Y608 721 aaKnown RBP19.36■□□□□ 0.69
NME3-211ENST00000568561 WDHD1O75717 1129 aaPredicted RBP19.35■□□□□ 0.69
NME3-211ENST00000568561 LDHBP07195 334 aaKnown RBP19.35■□□□□ 0.69
NME3-211ENST00000568561 ADORA1P30542 326 aa19.35■□□□□ 0.69
NME3-211ENST00000568561 LACTBP83111 547 aaPredicted RBP19.35■□□□□ 0.69
NME3-211ENST00000568561 SH3TC2Q8TF17 1288 aa19.35■□□□□ 0.69
NME3-211ENST00000568561 CEP126Q9P2H0 1117 aa19.35■□□□□ 0.69
NME3-211ENST00000568561 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
NME3-211ENST00000568561 CIAO1O76071 339 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 PPATQ06203 517 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 ARHGEF6Q15052 776 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 TMEM106CQ9BVX2 250 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 USP40Q9NVE5 1235 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 CPA4Q9UI42 421 aa19.34■□□□□ 0.69
NME3-211ENST00000568561 MEIS3Q99687 375 aa19.33■□□□□ 0.68
NME3-211ENST00000568561 ZCCHC17Q9NP64 241 aaKnown RBP19.33■□□□□ 0.68
NME3-211ENST00000568561 GNL3LQ9NVN8 582 aaKnown RBP19.33■□□□□ 0.68
NME3-211ENST00000568561 CTGFP29279 349 aa19.32■□□□□ 0.68
NME3-211ENST00000568561 KIF22Q14807 665 aa19.32■□□□□ 0.68
NME3-211ENST00000568561 SLC4A8Q2Y0W8 1093 aa19.32■□□□□ 0.68
NME3-211ENST00000568561 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
NME3-211ENST00000568561 PCDH10Q9P2E7 1040 aa19.32■□□□□ 0.68
NME3-211ENST00000568561 ZNF112Q9UJU3 913 aa19.32■□□□□ 0.68
NME3-211ENST00000568561 PTPRFP10586 1907 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 MGAMO43451 1857 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 PDHXO00330 501 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 IL15P40933 162 aaPredicted RBP19.31■□□□□ 0.68
NME3-211ENST00000568561 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 FBXO3Q9UK99 471 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 DENND2AQ9ULE3 1009 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 KCNH4Q9UQ05 1017 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 DOCK1Q14185 1865 aa19.31■□□□□ 0.68
NME3-211ENST00000568561 ADGRA2Q96PE1 1338 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 SALL1Q9NSC2 1324 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 SLURP2P0DP57 97 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 RGS3P49796 1198 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 MOGSQ13724 837 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 CCDC102BQ68D86 513 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 C17orf99Q6UX52 265 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 API5Q9BZZ5 524 aaKnown RBP19.3■□□□□ 0.68
NME3-211ENST00000568561 RFX7Q2KHR2 1363 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
NME3-211ENST00000568561 RASGRF1Q13972 1273 aa19.29■□□□□ 0.68
NME3-211ENST00000568561 HABP4Q5JVS0 413 aaKnown RBP19.29■□□□□ 0.68
NME3-211ENST00000568561 NOL9Q5SY16 702 aaKnown RBP19.29■□□□□ 0.68
NME3-211ENST00000568561 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
NME3-211ENST00000568561 TRIM47Q96LD4 638 aa19.29■□□□□ 0.68
NME3-211ENST00000568561 COPRSQ9NQ92 184 aa19.29■□□□□ 0.68
NME3-211ENST00000568561 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
NME3-211ENST00000568561 SEMA3EO15041 775 aa19.28■□□□□ 0.68
NME3-211ENST00000568561 PSMC4P43686 418 aa19.28■□□□□ 0.68
NME3-211ENST00000568561 TIMM10P62072 90 aa19.28■□□□□ 0.68
NME3-211ENST00000568561 SH3BP5LQ7L8J4 393 aa19.28■□□□□ 0.68
NME3-211ENST00000568561 DZIP1Q86YF9 867 aaKnown RBP19.28■□□□□ 0.68
NME3-211ENST00000568561 GAKO14976 1311 aa19.27■□□□□ 0.68
NME3-211ENST00000568561 CYP2C8P10632 490 aa19.27■□□□□ 0.68
NME3-211ENST00000568561 PICALMQ13492 652 aa19.27■□□□□ 0.68
NME3-211ENST00000568561 MTFR1Q15390 333 aa19.27■□□□□ 0.68
NME3-211ENST00000568561 ZSCAN29Q8IWY8 852 aaPredicted RBP19.27■□□□□ 0.68
NME3-211ENST00000568561 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.27■□□□□ 0.68
NME3-211ENST00000568561 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.27■□□□□ 0.68
NME3-211ENST00000568561 TRIOBPQ9H2D6 2365 aa19.27■□□□□ 0.67
NME3-211ENST00000568561 PHF20L1A8MW92 1017 aa19.26■□□□□ 0.67
NME3-211ENST00000568561 FMNL1O95466 1100 aaPredicted RBP19.26■□□□□ 0.67
NME3-211ENST00000568561 OSBPP22059 807 aa19.26■□□□□ 0.67
NME3-211ENST00000568561 TFCP2Q12800 502 aa19.26■□□□□ 0.67
NME3-211ENST00000568561 DDX4Q9NQI0 724 aaKnown RBP19.26■□□□□ 0.67
NME3-211ENST00000568561 SRRDQ9UH36 339 aa19.26■□□□□ 0.67
NME3-211ENST00000568561 A0A1B0GUL7 405 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms