RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 TAOK1Q7L7X3 1001 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 MSANTD4Q8NCY6 345 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 RPGRIP1Q96KN7 1286 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 NAA16Q6N069 864 aaPredicted RBP18.6■□□□□ 0.57
TSC2-222ENST00000568454 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 SYNRGQ9UMZ2 1314 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 NUTM2BA6NNL0 878 aaPredicted RBP18.6■□□□□ 0.57
TSC2-222ENST00000568454 NUTM2EB1AL46 878 aaPredicted RBP18.6■□□□□ 0.57
TSC2-222ENST00000568454 NDC80O14777 642 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 LEO1Q8WVC0 666 aaPredicted RBP18.6■□□□□ 0.57
TSC2-222ENST00000568454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.6■□□□□ 0.57
TSC2-222ENST00000568454 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
TSC2-222ENST00000568454 VPS16Q9H269 839 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 TSKSQ9UJT2 592 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 CUTAO60888 179 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 MTMR3Q13615 1198 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 ARHGAP24Q8N264 748 aa18.6■□□□□ 0.57
TSC2-222ENST00000568454 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
TSC2-222ENST00000568454 C6orf229H3BNL8 230 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 INF2Q27J81 1249 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 CCDC14Q49A88 953 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 RAPGEF1Q13905 1077 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 CD109Q6YHK3 1445 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 CLUL1Q15846 466 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
TSC2-222ENST00000568454 CCDC38Q502W7 563 aa18.58■□□□□ 0.57
TSC2-222ENST00000568454 SV2BQ7L1I2 683 aa18.58■□□□□ 0.57
TSC2-222ENST00000568454 PNMA8AQ86V59 439 aaPredicted RBP18.58■□□□□ 0.57
TSC2-222ENST00000568454 VSIG1Q86XK7 387 aa18.58■□□□□ 0.57
TSC2-222ENST00000568454 CCDC65Q8IXS2 484 aa18.58■□□□□ 0.57
TSC2-222ENST00000568454 RPUSD2Q8IZ73 545 aaKnown RBP18.58■□□□□ 0.57
TSC2-222ENST00000568454 ZBTB7BO15156 539 aaPredicted RBP18.58■□□□□ 0.56
TSC2-222ENST00000568454 NAP1L4Q99733 375 aaKnown RBP18.58■□□□□ 0.56
TSC2-222ENST00000568454 MAGEB6P1A0A0J9YX57 407 aa18.58■□□□□ 0.56
TSC2-222ENST00000568454 VWA3AA6NCI4 1184 aa18.58■□□□□ 0.56
TSC2-222ENST00000568454 ARL1P40616 181 aaPredicted RBP18.58■□□□□ 0.56
TSC2-222ENST00000568454 SLC4A8Q2Y0W8 1093 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 PSMD1Q99460 953 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 FAM169AQ9Y6X4 670 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 SMARCC2Q8TAQ2 1214 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 SPATS2Q86XZ4 545 aaKnown RBP18.57■□□□□ 0.56
TSC2-222ENST00000568454 MCUR1Q96AQ8 359 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 CNNM4Q6P4Q7 775 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 PLCB1Q9NQ66 1216 aa18.57■□□□□ 0.56
TSC2-222ENST00000568454 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
TSC2-222ENST00000568454 TRAF5O00463 557 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 ERCC5P28715 1186 aaPredicted RBP18.56■□□□□ 0.56
TSC2-222ENST00000568454 SND1Q7KZF4 910 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSC2-222ENST00000568454 SETSIPP0DME0 302 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 CASQ2O14958 399 aaPredicted RBP18.56■□□□□ 0.56
TSC2-222ENST00000568454 CPA1P15085 419 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 PAK1Q13153 545 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 ERCC6LQ2NKX8 1250 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 ACEP12821 1306 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 SLC27A2O14975 620 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 TNNI2P48788 182 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 FAM184BQ9ULE4 1060 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 SPOPO43791 374 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
TSC2-222ENST00000568454 WHAMMP3Q1A5X7 153 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 GKAP1Q5VSY0 366 aaPredicted RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 UBL4BQ8N7F7 174 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 GADD45BO75293 160 aaPredicted RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 DEXIO95424 95 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 EPB41P11171 864 aaKnown RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 TMEM87BQ96K49 555 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 MPHOSPH6Q99547 160 aaKnown RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 IDI1Q13907 227 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 CFAP221Q4G0U5 840 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 CCDC62Q6P9F0 684 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 PHLDB2Q86SQ0 1253 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 SPDYE3A6NKU9 549 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 ZNF202O95125 648 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 KRT9P35527 623 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 PDE4DQ08499 809 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 ASIC2Q16515 512 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 SLC9C1Q4G0N8 1177 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 DCAF17Q5H9S7 520 aaPredicted RBP18.55■□□□□ 0.56
TSC2-222ENST00000568454 CCDC51Q96ER9 411 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 NFE2L3Q9Y4A8 694 aa18.55■□□□□ 0.56
TSC2-222ENST00000568454 CSGALNACT2Q8N6G5 542 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 TNFAIP3P21580 790 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 ARHGEF2Q92974 986 aaKnown RBP18.54■□□□□ 0.56
TSC2-222ENST00000568454 BRD1O95696 1058 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 AKAP4Q5JQC9 854 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 WDR78Q5VTH9 848 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 CEP120Q8N960 986 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 MSH6P52701 1360 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 ZNF365Q70YC5 407 aa18.54■□□□□ 0.56
TSC2-222ENST00000568454 E7EVH7 732 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms