RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-223	ENST00000568301	SH3TC2	Q8TF17	1288 aa		18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	LPIN2	Q92539	896 aa		18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	FBXO3	Q9UK99	471 aa		18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	COLQ	Q9Y215	455 aa	Predicted RBP	18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	MYH13	Q9UKX3	1938 aa		18.82	■□□□□ 0.6
COMMD4-223	ENST00000568301	BTBD19	C9JJ37	291 aa		18.81	■□□□□ 0.6
COMMD4-223	ENST00000568301	TLR2	O60603	784 aa		18.81	■□□□□ 0.6
COMMD4-223	ENST00000568301	SLC5A1	P13866	664 aa		18.81	■□□□□ 0.6
COMMD4-223	ENST00000568301	ERO1B	Q86YB8	467 aa		18.81	■□□□□ 0.6
COMMD4-223	ENST00000568301	WRNIP1	Q96S55	665 aa		18.81	■□□□□ 0.6
COMMD4-223	ENST00000568301	IRF6	O14896	467 aa		18.8	■□□□□ 0.6
COMMD4-223	ENST00000568301	CETP	P11597	493 aa		18.8	■□□□□ 0.6
COMMD4-223	ENST00000568301	ATG9A	Q7Z3C6	839 aa		18.8	■□□□□ 0.6
COMMD4-223	ENST00000568301	ZCCHC17	Q9NP64	241 aa	Known RBP	18.8	■□□□□ 0.6
COMMD4-223	ENST00000568301	WDHD1	O75717	1129 aa	Predicted RBP	18.79	■□□□□ 0.6
COMMD4-223	ENST00000568301	LACTB	P83111	547 aa	Predicted RBP	18.79	■□□□□ 0.6
COMMD4-223	ENST00000568301	DCAF15	Q66K64	600 aa		18.79	■□□□□ 0.6
COMMD4-223	ENST00000568301	TRMT2A	Q8IZ69	625 aa	Known RBP	18.79	■□□□□ 0.6
COMMD4-223	ENST00000568301	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.79	■□□□□ 0.6
COMMD4-223	ENST00000568301	CIAO1	O76071	339 aa		18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	ECM2	O94769	699 aa	Predicted RBP	18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	SNAPC2	Q13487	334 aa		18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	KIF22	Q14807	665 aa		18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	SMC4	Q9NTJ3	1288 aa		18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	HDAC5	Q9UQL6	1122 aa		18.78	■□□□□ 0.6
COMMD4-223	ENST00000568301	AK9	Q5TCS8	1911 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	CT47B1	P0C2W7	299 aa	Predicted RBP	18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	UBTFL1	P0CB47	393 aa	Predicted RBP	18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	PPIL2	Q13356	520 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	FAM151A	Q8WW52	585 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	CDCA7L	Q96GN5	454 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	ZNF341	Q9BYN7	854 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	GNL3L	Q9NVN8	582 aa	Known RBP	18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301	CEP126	Q9P2H0	1117 aa		18.77	■□□□□ 0.6
COMMD4-223	ENST00000568301		H0YGN5	161 aa		18.76	■□□□□ 0.59
COMMD4-223	ENST00000568301	CTGF	P29279	349 aa		18.76	■□□□□ 0.59
COMMD4-223	ENST00000568301	PPAT	Q06203	517 aa		18.76	■□□□□ 0.59
COMMD4-223	ENST00000568301	MIGA2	Q7L4E1	593 aa		18.76	■□□□□ 0.59
COMMD4-223	ENST00000568301	TRIOBP	Q9H2D6	2365 aa		18.76	■□□□□ 0.59
COMMD4-223	ENST00000568301	SEMA3E	O15041	775 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	ZBTB22	O15209	634 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	GNRH1	P01148	92 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	INPP5B	P32019	993 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	MTFR1	Q15390	333 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	ATP2B3	Q16720	1220 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	C17orf99	Q6UX52	265 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	CPA4	Q9UI42	421 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	ZNF112	Q9UJU3	913 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	DAGLA	Q9Y4D2	1042 aa		18.75	■□□□□ 0.59
COMMD4-223	ENST00000568301	SALL1	Q9NSC2	1324 aa		18.74	■□□□□ 0.59
COMMD4-223	ENST00000568301	IL15	P40933	162 aa	Predicted RBP	18.74	■□□□□ 0.59
COMMD4-223	ENST00000568301	CDC42EP5	Q6NZY7	148 aa		18.74	■□□□□ 0.59
COMMD4-223	ENST00000568301	NOB1	Q9ULX3	412 aa	Known RBP	18.74	■□□□□ 0.59
COMMD4-223	ENST00000568301	LDHB	P07195	334 aa	Known RBP	18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	PRDX5	P30044	214 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	PSMC4	P43686	418 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	PRMT2	P55345	433 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	DIXDC1	Q155Q3	683 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	SHISA4	Q96DD7	197 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	TRIM47	Q96LD4	638 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	API5	Q9BZZ5	524 aa	Known RBP	18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	SIL1	Q9H173	461 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	DENND2A	Q9ULE3	1009 aa		18.73	■□□□□ 0.59
COMMD4-223	ENST00000568301	TCP10	Q12799	353 aa		18.72	■□□□□ 0.59
COMMD4-223	ENST00000568301	COPRS	Q9NQ92	184 aa		18.72	■□□□□ 0.59
COMMD4-223	ENST00000568301	SRRD	Q9UH36	339 aa		18.72	■□□□□ 0.59
COMMD4-223	ENST00000568301	PDHX	O00330	501 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	OSBP	P22059	807 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	NFIA	Q12857	509 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	ANKRD23	Q86SG2	305 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	USP40	Q9NVE5	1235 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	KCNH4	Q9UQ05	1017 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	LRRFIP2	Q9Y608	721 aa	Known RBP	18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	ADGRA2	Q96PE1	1338 aa		18.71	■□□□□ 0.59
COMMD4-223	ENST00000568301	MYH2	Q9UKX2	1941 aa		18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	FMNL1	O95466	1100 aa	Predicted RBP	18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	PHKA1	P46020	1223 aa		18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	MOGS	Q13724	837 aa		18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	CHRDL2	Q6WN34	429 aa		18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	ZGPAT	Q8N5A5	531 aa	Known RBP	18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	FAM198A	Q9UFP1	575 aa		18.7	■□□□□ 0.58
COMMD4-223	ENST00000568301	GRK4	P32298	578 aa		18.69	■□□□□ 0.58
COMMD4-223	ENST00000568301	NOL9	Q5SY16	702 aa	Known RBP	18.69	■□□□□ 0.58
COMMD4-223	ENST00000568301	CCDC102B	Q68D86	513 aa		18.69	■□□□□ 0.58
COMMD4-223	ENST00000568301	RAET1E	Q8TD07	263 aa		18.69	■□□□□ 0.58
COMMD4-223	ENST00000568301	DPF3	Q92784	378 aa		18.69	■□□□□ 0.58
COMMD4-223	ENST00000568301	HOXD10	P28358	340 aa		18.68	■□□□□ 0.58
COMMD4-223	ENST00000568301	ARHGAP45	Q92619	1136 aa		18.68	■□□□□ 0.58
COMMD4-223	ENST00000568301	IDI2	Q9BXS1	227 aa		18.68	■□□□□ 0.58
COMMD4-223	ENST00000568301	PA2G4	Q9UQ80	394 aa	Known RBP	18.68	■□□□□ 0.58
COMMD4-223	ENST00000568301	PDS5A	Q29RF7	1337 aa	Known RBP	18.68	■□□□□ 0.58
COMMD4-223	ENST00000568301	CXCL11	O14625	94 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	ENTPD3	O75355	529 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	CCL5	P13501	91 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	GJA8	P48165	433 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	ZFPM1	Q8IX07	1006 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	SLF2	Q8IX21	1173 aa		18.67	■□□□□ 0.58
COMMD4-223	ENST00000568301	FAM163A	Q96GL9	167 aa	Predicted RBP	18.67	■□□□□ 0.58

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