RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ARGLU1Q9NWB6 273 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-250ENST00000568290 TMOD3Q9NYL9 352 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-250ENST00000568290 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 MROH5Q6ZUA9 1318 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 SALL1Q9NSC2 1324 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 CYP27B1O15528 508 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 ZSCAN12O43309 604 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 CTIFO43310 598 aaKnown RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 PRC1O43663 620 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 OSBPP22059 807 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 SFPQP23246 707 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-250ENST00000568290 FOSBP53539 338 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 EVA1CP58658 441 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 NLRP12P59046 1061 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 RBM10P98175 930 aaKnown RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-250ENST00000568290 APOBRQ0VD83 1088 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 MAP3K12Q12852 859 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 ALX1Q15699 326 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 UTP14CQ5TAP6 766 aaKnown RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 CEP135Q66GS9 1140 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 LRRC8AQ8IWT6 810 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
ATXN3-250ENST00000568290 ANGEL1Q9UNK9 670 aaKnown RBP8.83□□□□□ -1
ATXN3-250ENST00000568290 MAST3O60307 1309 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 STK36Q9NRP7 1315 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
ATXN3-250ENST00000568290 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 MEGF6O75095 1541 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 PRAMEF22A3QJZ6 481 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 JAK2O60674 1132 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 CUTAO60888 179 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 PCP11498 1178 aaKnown RBP8.82□□□□□ -1
ATXN3-250ENST00000568290 SKILP12757 684 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 PTGS1P23219 599 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-250ENST00000568290 IQCB1Q15051 598 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 ATP2B3Q16720 1220 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 METTL24Q5JXM2 366 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 MYSM1Q5VVJ2 828 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 LINC00301Q8NCQ3 95 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
ATXN3-250ENST00000568290 ERO1AQ96HE7 468 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 CHAMP1Q96JM3 812 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 PGBD1Q96JS3 809 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 OGFRQ9NZT2 677 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
ATXN3-250ENST00000568290 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
ATXN3-250ENST00000568290 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 CCDC69A6NI79 296 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 ERVV-1B6SEH8 477 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 CSF1RP07333 972 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 SLC5A1P13866 664 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 IARSP41252 1262 aaKnown RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 LIFRP42702 1097 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 AKAP17AQ02040 695 aaKnown RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 TUBB2AQ13885 445 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 SLC39A14Q15043 492 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 SLFNL1Q499Z3 407 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 ANO1Q5XXA6 986 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 CCDC102BQ68D86 513 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 LDHAL6AQ6ZMR3 332 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 NFXL1Q6ZNB6 911 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 TRIML1Q8N9V2 468 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 ENGASEQ8NFI3 743 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 AIDAQ96BJ3 306 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 XAGE2Q96GT9 111 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 USP28Q96RU2 1077 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 TUBB2BQ9BVA1 445 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 CNNM1Q9NRU3 951 aa8.81□□□□□ -1
ATXN3-250ENST00000568290 GNL3LQ9NVN8 582 aaKnown RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 MORC2Q9Y6X9 1032 aaPredicted RBP8.81□□□□□ -1
ATXN3-250ENST00000568290 ATRNO75882 1429 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 TCHHQ07283 1943 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 POTEB3A0JP26 581 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 ZBTB43O43298 467 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 PDE8AO60658 829 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 KIF20AO95235 890 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 SMC2O95347 1197 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 SYKP43405 635 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 TIMM10P62072 90 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 CCT2P78371 535 aaKnown RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 SEMA3FQ13275 785 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 RILPL1Q5EBL4 403 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms