RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-216ENST00000567023 CSADQ9Y600 493 aa17.66■□□□□ 0.42
COMMD4-216ENST00000567023 HTTP42858 3142 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-216ENST00000567023 TFCP2Q12800 502 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 DIXDC1Q155Q3 683 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 CDC42EP5Q6NZY7 148 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 CENPFP49454 3210 aa17.65■□□□□ 0.42
COMMD4-216ENST00000567023 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
COMMD4-216ENST00000567023 RASGRF1Q13972 1273 aa17.64■□□□□ 0.41
COMMD4-216ENST00000567023 DCAF15Q66K64 600 aa17.64■□□□□ 0.41
COMMD4-216ENST00000567023 TMEM57Q8N5G2 664 aa17.64■□□□□ 0.41
COMMD4-216ENST00000567023 FAM163AQ96GL9 167 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-216ENST00000567023 XAGE2Q96GT9 111 aa17.64■□□□□ 0.41
COMMD4-216ENST00000567023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-216ENST00000567023 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
COMMD4-216ENST00000567023 GTF2A2P52657 109 aa17.63■□□□□ 0.41
COMMD4-216ENST00000567023 MVPQ14764 893 aaKnown RBP17.63■□□□□ 0.41
COMMD4-216ENST00000567023 FBXO46Q6PJ61 603 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-216ENST00000567023 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
COMMD4-216ENST00000567023 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
COMMD4-216ENST00000567023 SNCAIPQ9Y6H5 919 aa17.63■□□□□ 0.41
COMMD4-216ENST00000567023 NFIAQ12857 509 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 CRHR2Q13324 411 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 USP40Q9NVE5 1235 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 ZNF112Q9UJU3 913 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 GAKO14976 1311 aa17.62■□□□□ 0.41
COMMD4-216ENST00000567023 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-216ENST00000567023 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-216ENST00000567023 SLF2Q8IX21 1173 aa17.61■□□□□ 0.41
COMMD4-216ENST00000567023 BRI3BPQ8WY22 251 aa17.61■□□□□ 0.41
COMMD4-216ENST00000567023 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-216ENST00000567023 IDI2Q9BXS1 227 aa17.61■□□□□ 0.41
COMMD4-216ENST00000567023 ZNF341Q9BYN7 854 aa17.61■□□□□ 0.41
COMMD4-216ENST00000567023 TCP10Q12799 353 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.41
COMMD4-216ENST00000567023 POLA2Q14181 598 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 MIGA2Q7L4E1 593 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 OTUD5Q96G74 571 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 ABCF2Q9UG63 623 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 ZBED9Q6R2W3 1325 aa17.6■□□□□ 0.41
COMMD4-216ENST00000567023 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
COMMD4-216ENST00000567023 IRF6O14896 467 aa17.59■□□□□ 0.41
COMMD4-216ENST00000567023 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-216ENST00000567023 ATP8B2P98198 1209 aa17.59■□□□□ 0.41
COMMD4-216ENST00000567023 CCL15Q16663 113 aa17.59■□□□□ 0.41
COMMD4-216ENST00000567023 DZIP1Q86YF9 867 aaKnown RBP17.59■□□□□ 0.41
COMMD4-216ENST00000567023 ZCCHC17Q9NP64 241 aaKnown RBP17.59■□□□□ 0.41
COMMD4-216ENST00000567023 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
COMMD4-216ENST00000567023 ENTPD3O75355 529 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 CETPP11597 493 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-216ENST00000567023 SP3Q02447 781 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 PPATQ06203 517 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 PPIL2Q13356 520 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 ERO1AQ96HE7 468 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 GPR108Q9NPR9 543 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 HMG20BQ9P0W2 317 aa17.58■□□□□ 0.4
COMMD4-216ENST00000567023 BRCA2P51587 3418 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 RFX7Q2KHR2 1363 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 MAP3K10Q02779 954 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 MECOMQ03112 1051 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 SNAPC2Q13487 334 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 NOL9Q5SY16 702 aaKnown RBP17.57■□□□□ 0.4
COMMD4-216ENST00000567023 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 ZFPM1Q8IX07 1006 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
COMMD4-216ENST00000567023 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 ZFYVE28Q9HCC9 887 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
COMMD4-216ENST00000567023 ATRNL1Q5VV63 1379 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 GPR75-ASB3A0A0A6YYF3 556 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-216ENST00000567023 RLBP1P12271 317 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 INPP5BP32019 993 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 RGS3P49796 1198 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 SOX10P56693 466 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 ZNF384Q8TF68 577 aa17.56■□□□□ 0.4
COMMD4-216ENST00000567023 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
COMMD4-216ENST00000567023 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
COMMD4-216ENST00000567023 MAP4K4O95819 1239 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-216ENST00000567023 UQCRFS1P1P0C7P4 283 aa17.55■□□□□ 0.4
COMMD4-216ENST00000567023 TAF1CQ15572 869 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-216ENST00000567023 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
COMMD4-216ENST00000567023 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
COMMD4-216ENST00000567023 MKI67P46013 3256 aaKnown RBP17.54■□□□□ 0.4
COMMD4-216ENST00000567023 PHF20L1A8MW92 1017 aa17.54■□□□□ 0.4
COMMD4-216ENST00000567023 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
COMMD4-216ENST00000567023 MCAMP43121 646 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms