RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 DCAF15Q66K64 600 aa23.14■■□□□ 1.29
IFT140-208ENST00000566818 SSH3Q8TE77 659 aa23.14■■□□□ 1.29
IFT140-208ENST00000566818 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.29
IFT140-208ENST00000566818 ABCF2Q9UG63 623 aa23.14■■□□□ 1.29
IFT140-208ENST00000566818 ELP3Q9H9T3 547 aa23.13■■□□□ 1.29
IFT140-208ENST00000566818 ZBTB7BO15156 539 aaPredicted RBP23.12■■□□□ 1.29
IFT140-208ENST00000566818 TBC1D8O95759 1140 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 MAP3K9P80192 1104 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 CDC42EP5Q6NZY7 148 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.12■■□□□ 1.29
IFT140-208ENST00000566818 FAM151AQ8WW52 585 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 CFHR5Q9BXR6 569 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
IFT140-208ENST00000566818 UQCRFS1P1P0C7P4 283 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 VGLL4Q14135 290 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 NOM1Q5C9Z4 860 aaKnown RBP23.11■■□□□ 1.29
IFT140-208ENST00000566818 OTUD7BQ6GQQ9 843 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 IFNL1Q8IU54 200 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 OPTNQ96CV9 577 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 USP40Q9NVE5 1235 aa23.11■■□□□ 1.29
IFT140-208ENST00000566818 GAKO14976 1311 aa23.1■■□□□ 1.29
IFT140-208ENST00000566818 MYH2Q9UKX2 1941 aa23.1■■□□□ 1.29
IFT140-208ENST00000566818 SURF6O75683 361 aaKnown RBP23.1■■□□□ 1.29
IFT140-208ENST00000566818 ARID4AP29374 1257 aaPredicted RBP23.1■■□□□ 1.29
IFT140-208ENST00000566818 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.1■■□□□ 1.29
IFT140-208ENST00000566818 ERICH6Q7L0X2 663 aa23.1■■□□□ 1.29
IFT140-208ENST00000566818 CTU1Q7Z7A3 348 aaKnown RBP23.1■■□□□ 1.29
IFT140-208ENST00000566818 SPATA5Q8NB90 893 aa23.1■■□□□ 1.29
IFT140-208ENST00000566818 WRNIP1Q96S55 665 aa23.1■■□□□ 1.29
IFT140-208ENST00000566818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.1■■□□□ 1.29
IFT140-208ENST00000566818 GJA5P36382 358 aa23.09■■□□□ 1.29
IFT140-208ENST00000566818 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
IFT140-208ENST00000566818 ZNF341Q9BYN7 854 aa23.09■■□□□ 1.29
IFT140-208ENST00000566818 HMG20BQ9P0W2 317 aa23.09■■□□□ 1.29
IFT140-208ENST00000566818 CCDC85CA6NKD9 419 aa23.08■■□□□ 1.29
IFT140-208ENST00000566818 GPR25O00155 361 aa23.08■■□□□ 1.29
IFT140-208ENST00000566818 TCP10Q12799 353 aa23.08■■□□□ 1.29
IFT140-208ENST00000566818 TNNI3KQ59H18 835 aa23.08■■□□□ 1.29
IFT140-208ENST00000566818 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
IFT140-208ENST00000566818 FPGT-TNNI3KV9GXZ4 949 aa23.08■■□□□ 1.29
IFT140-208ENST00000566818 MROH7-TTC4A0A0A0MT08 1334 aa23.08■■□□□ 1.28
IFT140-208ENST00000566818 GSTO1P78417 241 aa23.07■■□□□ 1.28
IFT140-208ENST00000566818 NFIAQ12857 509 aa23.07■■□□□ 1.28
IFT140-208ENST00000566818 TTC39AQ5SRH9 613 aa23.07■■□□□ 1.28
IFT140-208ENST00000566818 FAM163AQ96GL9 167 aaPredicted RBP23.07■■□□□ 1.28
IFT140-208ENST00000566818 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
IFT140-208ENST00000566818 IGF2BP3O00425 579 aaKnown RBP eCLIP23.06■■□□□ 1.28
IFT140-208ENST00000566818 CCDC158Q5M9N0 1113 aa23.06■■□□□ 1.28
IFT140-208ENST00000566818 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
IFT140-208ENST00000566818 OTUD5Q96G74 571 aa23.06■■□□□ 1.28
IFT140-208ENST00000566818 TESPA1A2RU30 521 aaPredicted RBP23.05■■□□□ 1.28
IFT140-208ENST00000566818 SPDYE5A6NIY4 337 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 FKTNO75072 461 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 LDHCP07864 332 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 BTDP43251 543 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 GTF2A2P52657 109 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 MECOMQ03112 1051 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 IDI2Q9BXS1 227 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 FAM198AQ9UFP1 575 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 SNCAIPQ9Y6H5 919 aa23.05■■□□□ 1.28
IFT140-208ENST00000566818 RFX7Q2KHR2 1363 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 AK9Q5TCS8 1911 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 DOCK2Q92608 1830 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 ENTPD3O75355 529 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 MCAMP43121 646 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 RGS3P49796 1198 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 PI16Q6UXB8 463 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 ERO1BQ86YB8 467 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 ERC1Q8IUD2 1116 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 RAI14Q9P0K7 980 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 DDX19BQ9UMR2 479 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
IFT140-208ENST00000566818 PKN2Q16513 984 aaKnown RBP23.03■■□□□ 1.28
IFT140-208ENST00000566818 MIGA2Q7L4E1 593 aa23.03■■□□□ 1.28
IFT140-208ENST00000566818 CNKSR2Q8WXI2 1034 aa23.03■■□□□ 1.28
IFT140-208ENST00000566818 ZKSCAN4Q969J2 545 aaPredicted RBP23.03■■□□□ 1.28
IFT140-208ENST00000566818 DBNDD2Q9BQY9 259 aa23.03■■□□□ 1.28
IFT140-208ENST00000566818 CHMP4BQ9H444 224 aaKnown RBP23.03■■□□□ 1.28
IFT140-208ENST00000566818 CCL15-CCL14A0A0B4J2E2 113 aa23.02■■□□□ 1.28
IFT140-208ENST00000566818 MAP4K4O95819 1239 aaPredicted RBP23.02■■□□□ 1.28
IFT140-208ENST00000566818 CCL15Q16663 113 aa23.02■■□□□ 1.28
IFT140-208ENST00000566818 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
IFT140-208ENST00000566818 NSUN4Q96CB9 384 aaKnown RBP23.02■■□□□ 1.28
IFT140-208ENST00000566818 LRP2BPQ9P2M1 347 aa23.02■■□□□ 1.28
IFT140-208ENST00000566818 GPR75-ASB3A0A0A6YYF3 556 aa23.01■■□□□ 1.27
IFT140-208ENST00000566818 PPIL2Q13356 520 aa23.01■■□□□ 1.27
IFT140-208ENST00000566818 HSP90AB4PQ58FF6 505 aa23.01■■□□□ 1.27
IFT140-208ENST00000566818 TBC1D9Q6ZT07 1266 aa23.01■■□□□ 1.27
IFT140-208ENST00000566818 MS4A4AQ96JQ5 239 aa23.01■■□□□ 1.27
IFT140-208ENST00000566818 NOL10Q9BSC4 688 aaKnown RBP23.01■■□□□ 1.27
IFT140-208ENST00000566818 WDHD1O75717 1129 aaPredicted RBP23■■□□□ 1.27
IFT140-208ENST00000566818 CETPP11597 493 aa23■■□□□ 1.27
IFT140-208ENST00000566818 SNAPC2Q13487 334 aa23■■□□□ 1.27
IFT140-208ENST00000566818 PICALMQ13492 652 aa23■■□□□ 1.27
IFT140-208ENST00000566818 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
IFT140-208ENST00000566818 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
IFT140-208ENST00000566818 R3HDMLQ9H3Y0 253 aa23■■□□□ 1.27
IFT140-208ENST00000566818 ZNF112Q9UJU3 913 aa23■■□□□ 1.27
IFT140-208ENST00000566818 HMMRO75330 724 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms