RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 DIXDC1Q155Q3 683 aa24.97■■□□□ 1.59
CLN6-207ENST00000566347 DCAF15Q66K64 600 aa24.97■■□□□ 1.59
CLN6-207ENST00000566347 TESPA1A2RU30 521 aaPredicted RBP24.96■■□□□ 1.59
CLN6-207ENST00000566347 MVPQ14764 893 aaKnown RBP24.96■■□□□ 1.59
CLN6-207ENST00000566347 TMEM57Q8N5G2 664 aa24.96■■□□□ 1.59
CLN6-207ENST00000566347 R3HDMLQ9H3Y0 253 aa24.96■■□□□ 1.59
CLN6-207ENST00000566347 CDC42EP5Q6NZY7 148 aa24.95■■□□□ 1.58
CLN6-207ENST00000566347 FAM151AQ8WW52 585 aa24.95■■□□□ 1.58
CLN6-207ENST00000566347 XAGE2Q96GT9 111 aa24.95■■□□□ 1.58
CLN6-207ENST00000566347 GTF2A2P52657 109 aa24.94■■□□□ 1.58
CLN6-207ENST00000566347 MLLT1Q03111 559 aaPredicted RBP24.94■■□□□ 1.58
CLN6-207ENST00000566347 RASGRF1Q13972 1273 aa24.94■■□□□ 1.58
CLN6-207ENST00000566347 WRNIP1Q96S55 665 aa24.94■■□□□ 1.58
CLN6-207ENST00000566347 PNMA6EA0A0J9YXQ4 647 aa24.93■■□□□ 1.58
CLN6-207ENST00000566347 G3BP1Q13283 466 aaKnown RBP eCLIP24.93■■□□□ 1.58
CLN6-207ENST00000566347 SPTY2D1Q68D10 685 aaPredicted RBP24.93■■□□□ 1.58
CLN6-207ENST00000566347 SLF2Q8IX21 1173 aa24.93■■□□□ 1.58
CLN6-207ENST00000566347 FTSJ3Q8IY81 847 aaKnown RBP24.93■■□□□ 1.58
CLN6-207ENST00000566347 MS4A4AQ96JQ5 239 aa24.93■■□□□ 1.58
CLN6-207ENST00000566347 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 SPDYE5A6NIY4 337 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 DZIP1Q86YF9 867 aaKnown RBP24.92■■□□□ 1.58
CLN6-207ENST00000566347 CNKSR2Q8WXI2 1034 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 OTUD5Q96G74 571 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 NEUROD6Q96NK8 337 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 PTPN18Q99952 460 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 ZNF341Q9BYN7 854 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 USP40Q9NVE5 1235 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 HPS5Q9UPZ3 1129 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 MYH2Q9UKX2 1941 aa24.92■■□□□ 1.58
CLN6-207ENST00000566347 FBXO46Q6PJ61 603 aaPredicted RBP24.91■■□□□ 1.58
CLN6-207ENST00000566347 ERO1BQ86YB8 467 aa24.91■■□□□ 1.58
CLN6-207ENST00000566347 ABCF2Q9UG63 623 aa24.91■■□□□ 1.58
CLN6-207ENST00000566347 SNCAIPQ9Y6H5 919 aa24.91■■□□□ 1.58
CLN6-207ENST00000566347 GAKO14976 1311 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 CCL15-CCL14A0A0B4J2E2 113 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 TCP10Q12799 353 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 NFIAQ12857 509 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 CRHR2Q13324 411 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 CCL15Q16663 113 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 GORABQ5T7V8 394 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 AK9Q5TCS8 1911 aa24.9■■□□□ 1.58
CLN6-207ENST00000566347 MIGA2Q7L4E1 593 aa24.89■■□□□ 1.58
CLN6-207ENST00000566347 BRI3BPQ8WY22 251 aa24.89■■□□□ 1.58
CLN6-207ENST00000566347 ZKSCAN4Q969J2 545 aaPredicted RBP24.89■■□□□ 1.58
CLN6-207ENST00000566347 FAM163AQ96GL9 167 aaPredicted RBP24.89■■□□□ 1.58
CLN6-207ENST00000566347 FAM198AQ9UFP1 575 aa24.89■■□□□ 1.58
CLN6-207ENST00000566347 ERO1AQ96HE7 468 aa24.88■■□□□ 1.57
CLN6-207ENST00000566347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.88■■□□□ 1.57
CLN6-207ENST00000566347 CETPP11597 493 aa24.87■■□□□ 1.57
CLN6-207ENST00000566347 POLA2Q14181 598 aa24.87■■□□□ 1.57
CLN6-207ENST00000566347 ERICH6Q7L0X2 663 aa24.87■■□□□ 1.57
CLN6-207ENST00000566347 ITPRIPQ8IWB1 547 aa24.87■■□□□ 1.57
CLN6-207ENST00000566347 IDI2Q9BXS1 227 aa24.87■■□□□ 1.57
CLN6-207ENST00000566347 ENTPD3O75355 529 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 ARID4AP29374 1257 aaPredicted RBP24.86■■□□□ 1.57
CLN6-207ENST00000566347 ATP8B2P98198 1209 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 PPIL2Q13356 520 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 SSH3Q8TE77 659 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 HMG20BQ9P0W2 317 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 ZNF112Q9UJU3 913 aa24.86■■□□□ 1.57
CLN6-207ENST00000566347 WDHD1O75717 1129 aaPredicted RBP24.85■■□□□ 1.57
CLN6-207ENST00000566347 UQCRFS1P1P0C7P4 283 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 SOX10P56693 466 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 PPATQ06203 517 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 SNAPC2Q13487 334 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 SPATA5Q8NB90 893 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 ZFYVE28Q9HCC9 887 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 ZCCHC17Q9NP64 241 aaKnown RBP24.85■■□□□ 1.57
CLN6-207ENST00000566347 GPR108Q9NPR9 543 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 TRIM17Q9Y577 477 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 MROH7-TTC4A0A0A0MT08 1334 aa24.85■■□□□ 1.57
CLN6-207ENST00000566347 IRF6O14896 467 aa24.84■■□□□ 1.57
CLN6-207ENST00000566347 INPP5BP32019 993 aa24.84■■□□□ 1.57
CLN6-207ENST00000566347 RGS3P49796 1198 aa24.84■■□□□ 1.57
CLN6-207ENST00000566347 SP3Q02447 781 aa24.84■■□□□ 1.57
CLN6-207ENST00000566347 OS9Q13438 667 aaPredicted RBP24.84■■□□□ 1.57
CLN6-207ENST00000566347 TAF1CQ15572 869 aaPredicted RBP24.84■■□□□ 1.57
CLN6-207ENST00000566347 RFX7Q2KHR2 1363 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 ZBTB7BO15156 539 aaPredicted RBP24.83■■□□□ 1.57
CLN6-207ENST00000566347 RLBP1P12271 317 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 BTDP43251 543 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 GSTO1P78417 241 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 MECOMQ03112 1051 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 OTOP1Q7RTM1 612 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 FAM43AQ8N2R8 423 aa24.83■■□□□ 1.57
CLN6-207ENST00000566347 DOCK2Q92608 1830 aa24.82■■□□□ 1.56
CLN6-207ENST00000566347 LDHCP07864 332 aa24.82■■□□□ 1.56
CLN6-207ENST00000566347 NOL9Q5SY16 702 aaKnown RBP24.82■■□□□ 1.56
CLN6-207ENST00000566347 ZFPM1Q8IX07 1006 aa24.82■■□□□ 1.56
CLN6-207ENST00000566347 CD99L2Q8TCZ2 262 aa24.82■■□□□ 1.56
CLN6-207ENST00000566347 C1orf115Q9H7X2 142 aa24.82■■□□□ 1.56
CLN6-207ENST00000566347 GPR75-ASB3A0A0A6YYF3 556 aa24.81■■□□□ 1.56
CLN6-207ENST00000566347 SURF6O75683 361 aaKnown RBP24.81■■□□□ 1.56
CLN6-207ENST00000566347 MAP4K4O95819 1239 aaPredicted RBP24.81■■□□□ 1.56
CLN6-207ENST00000566347 TNNI3KQ59H18 835 aa24.81■■□□□ 1.56
CLN6-207ENST00000566347 PI16Q6UXB8 463 aa24.81■■□□□ 1.56
CLN6-207ENST00000566347 ZSCAN29Q8IWY8 852 aaPredicted RBP24.81■■□□□ 1.56
CLN6-207ENST00000566347 FPGT-TNNI3KV9GXZ4 949 aa24.81■■□□□ 1.56
CLN6-207ENST00000566347 MCAMP43121 646 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms