RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
SF3B3-205ENST00000564899 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
SF3B3-205ENST00000564899 MAP3K12Q12852 859 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
SF3B3-205ENST00000564899 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 ABCF2Q9UG63 623 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
SF3B3-205ENST00000564899 PSMD14O00487 310 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 SGSM2O43147 1006 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 ECE2O60344 883 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 TRPA1O75762 1119 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 REC8O95072 547 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 CHGBP05060 677 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 ADD2P35612 726 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 SLC9C2Q5TAH2 1124 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 ZGPATQ8N5A5 531 aaKnown RBP13.34□□□□□ -0.27
SF3B3-205ENST00000564899 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
SF3B3-205ENST00000564899 IL25Q9H293 177 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 SALL1Q9NSC2 1324 aa13.34□□□□□ -0.27
SF3B3-205ENST00000564899 PDE6AP16499 860 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-205ENST00000564899 RGMBQ6NW40 437 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 ERICH6Q7L0X2 663 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 APPBP2Q92624 585 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
SF3B3-205ENST00000564899 GTF2IP78347 998 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
SF3B3-205ENST00000564899 GBA2Q9HCG7 927 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-205ENST00000564899 ANO2Q9NQ90 1003 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 MAST3O60307 1309 aa13.32□□□□□ -0.28
SF3B3-205ENST00000564899 IGSF3O75054 1194 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
SF3B3-205ENST00000564899 PRDX5P30044 214 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 TNIP1Q15025 636 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
SF3B3-205ENST00000564899 KIAA1211Q6ZU35 1233 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-205ENST00000564899 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
SF3B3-205ENST00000564899 OSBP2Q969R2 916 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
SF3B3-205ENST00000564899 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
SF3B3-205ENST00000564899 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 M0R2C6 588 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 SLC10A3P09131 477 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 CYP7A1P22680 504 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 ZNF157P51786 506 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-205ENST00000564899 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-205ENST00000564899 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
SF3B3-205ENST00000564899 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 MYH13Q9UKX3 1938 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
SF3B3-205ENST00000564899 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 H7C1D1 291 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 MECOMQ03112 1051 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 GRIK5Q16478 980 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 PRPF38BQ5VTL8 546 aaKnown RBP13.29□□□□□ -0.28
SF3B3-205ENST00000564899 TMED8Q6PL24 325 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-205ENST00000564899 MOB2Q70IA6 237 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 LSG1Q9H089 658 aaKnown RBP13.29□□□□□ -0.28
SF3B3-205ENST00000564899 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
SF3B3-205ENST00000564899 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
SF3B3-205ENST00000564899 GPAA1O43292 621 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
SF3B3-205ENST00000564899 GSTO1P78417 241 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
SF3B3-205ENST00000564899 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 TBC1D32Q96NH3 1257 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
SF3B3-205ENST00000564899 MAST2Q6P0Q8 1798 aa13.27□□□□□ -0.28
SF3B3-205ENST00000564899 MBD4O95243 580 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 MCCP23508 829 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms