RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
CLN6-203ENST00000563917 MYH13Q9UKX3 1938 aa11.84□□□□□ -0.51
CLN6-203ENST00000563917 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
CLN6-203ENST00000563917 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
CLN6-203ENST00000563917 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
CLN6-203ENST00000563917 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 CD99L2Q8TCZ2 262 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
CLN6-203ENST00000563917 MEIS3Q99687 375 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 USP40Q9NVE5 1235 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 ABCF2Q9UG63 623 aa11.83□□□□□ -0.52
CLN6-203ENST00000563917 GNAI2P04899 355 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 TCP10Q12799 353 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 BRI3BPQ8WY22 251 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 ZKSCAN4Q969J2 545 aaPredicted RBP11.82□□□□□ -0.52
CLN6-203ENST00000563917 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 NEUROD6Q96NK8 337 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 PTPN18Q99952 460 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 PA2G4Q9UQ80 394 aaKnown RBP11.82□□□□□ -0.52
CLN6-203ENST00000563917 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 SALL1Q9NSC2 1324 aa11.82□□□□□ -0.52
CLN6-203ENST00000563917 PRDX5P30044 214 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 PHKA1P46020 1223 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 PPATQ06203 517 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLN6-203ENST00000563917 PPIL2Q13356 520 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 CDC42EP5Q6NZY7 148 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
CLN6-203ENST00000563917 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 ZCCHC17Q9NP64 241 aaKnown RBP11.81□□□□□ -0.52
CLN6-203ENST00000563917 AK9Q5TCS8 1911 aa11.81□□□□□ -0.52
CLN6-203ENST00000563917 OTOFQ9HC10 1997 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 A0A1B0GUL7 405 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 TIMM10P62072 90 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 PTPN22Q9Y2R2 807 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
CLN6-203ENST00000563917 LAMB1P07942 1786 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 IRF6O14896 467 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 TLR2O60603 784 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 LDHCP07864 332 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 ADORA1P30542 326 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 GSTO1P78417 241 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 TFCP2Q12800 502 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
CLN6-203ENST00000563917 MTX1Q13505 466 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 XAGE2Q96GT9 111 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
CLN6-203ENST00000563917 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 PICK1Q9NRD5 415 aa11.79□□□□□ -0.52
CLN6-203ENST00000563917 PDS5AQ29RF7 1337 aaKnown RBP11.79□□□□□ -0.52
CLN6-203ENST00000563917 BTBD19C9JJ37 291 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 ZBTB22O15209 634 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 ENTPD3O75355 529 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 GNRH1P01148 92 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 TRIM27P14373 513 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 INPP5BP32019 993 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 NFIAQ12857 509 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 RASGRF1Q13972 1273 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
CLN6-203ENST00000563917 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
CLN6-203ENST00000563917 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
CLN6-203ENST00000563917 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
CLN6-203ENST00000563917 BTDP43251 543 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 RGS3P49796 1198 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 PRMT2P55345 433 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLN6-203ENST00000563917 PICALMQ13492 652 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 ANKRD23Q86SG2 305 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 IDI2Q9BXS1 227 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
CLN6-203ENST00000563917 CXCL11O14625 94 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 BCAR3O75815 825 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 MAP4K4O95819 1239 aaPredicted RBP11.76□□□□□ -0.53
CLN6-203ENST00000563917 UQCRFS1P1P0C7P4 283 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 HOXD10P28358 340 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 NOL9Q5SY16 702 aaKnown RBP11.76□□□□□ -0.53
CLN6-203ENST00000563917 FASTKD5Q7L8L6 764 aaKnown RBP11.76□□□□□ -0.53
CLN6-203ENST00000563917 ARMC5Q96C12 935 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
CLN6-203ENST00000563917 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
CLN6-203ENST00000563917 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 GAKO14976 1311 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 PDE4DIPQ5VU43 2346 aa11.76□□□□□ -0.53
CLN6-203ENST00000563917 PDHXO00330 501 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
CLN6-203ENST00000563917 CCDC158Q5M9N0 1113 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms