RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 WDR66Q8TBY9 1149 aa23.4■■□□□ 1.34
NME3-204ENST00000563498 EYA2O00167 538 aa23.39■■□□□ 1.33
NME3-204ENST00000563498 LPIN2Q92539 896 aa23.39■■□□□ 1.33
NME3-204ENST00000563498 ZNF341Q9BYN7 854 aa23.39■■□□□ 1.33
NME3-204ENST00000563498 SLC5A1P13866 664 aa23.38■■□□□ 1.33
NME3-204ENST00000563498 RFX5P48382 616 aaPredicted RBP23.38■■□□□ 1.33
NME3-204ENST00000563498 PRMT2P55345 433 aa23.38■■□□□ 1.33
NME3-204ENST00000563498 FAM151AQ8WW52 585 aa23.38■■□□□ 1.33
NME3-204ENST00000563498 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
NME3-204ENST00000563498 MYH13Q9UKX3 1938 aa23.36■■□□□ 1.33
NME3-204ENST00000563498 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
NME3-204ENST00000563498 E9PSI1 815 aa23.36■■□□□ 1.33
NME3-204ENST00000563498 SLC4A8Q2Y0W8 1093 aa23.36■■□□□ 1.33
NME3-204ENST00000563498 ARHGAP39Q9C0H5 1083 aa23.36■■□□□ 1.33
NME3-204ENST00000563498 ZNF112Q9UJU3 913 aa23.36■■□□□ 1.33
NME3-204ENST00000563498 C17orf99Q6UX52 265 aa23.35■■□□□ 1.33
NME3-204ENST00000563498 MIGA2Q7L4E1 593 aa23.35■■□□□ 1.33
NME3-204ENST00000563498 ANKRD23Q86SG2 305 aa23.35■■□□□ 1.33
NME3-204ENST00000563498 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
NME3-204ENST00000563498 INPP5BP32019 993 aa23.34■■□□□ 1.33
NME3-204ENST00000563498 ATG9AQ7Z3C6 839 aa23.34■■□□□ 1.33
NME3-204ENST00000563498 KCNH4Q9UQ05 1017 aa23.34■■□□□ 1.33
NME3-204ENST00000563498 DAGLAQ9Y4D2 1042 aa23.34■■□□□ 1.33
NME3-204ENST00000563498 ZSWIM8A7E2V4 1837 aa23.33■■□□□ 1.33
NME3-204ENST00000563498 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
NME3-204ENST00000563498 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
NME3-204ENST00000563498 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.33
NME3-204ENST00000563498 SH3TC2Q8TF17 1288 aa23.33■■□□□ 1.33
NME3-204ENST00000563498 CIAO1O76071 339 aa23.32■■□□□ 1.32
NME3-204ENST00000563498 ALDH1L2Q3SY69 923 aa23.32■■□□□ 1.32
NME3-204ENST00000563498 NOL9Q5SY16 702 aaKnown RBP23.32■■□□□ 1.32
NME3-204ENST00000563498 GNL3LQ9NVN8 582 aaKnown RBP23.32■■□□□ 1.32
NME3-204ENST00000563498 SALL1Q9NSC2 1324 aa23.32■■□□□ 1.32
NME3-204ENST00000563498 ZBTB22O15209 634 aa23.31■■□□□ 1.32
NME3-204ENST00000563498 TCP10Q12799 353 aa23.31■■□□□ 1.32
NME3-204ENST00000563498 DIXDC1Q155Q3 683 aa23.31■■□□□ 1.32
NME3-204ENST00000563498 ADGRA2Q96PE1 1338 aa23.31■■□□□ 1.32
NME3-204ENST00000563498 PDHXO00330 501 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 SEMA3EO15041 775 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 LDHBP07195 334 aaKnown RBP23.3■■□□□ 1.32
NME3-204ENST00000563498 PRDX5P30044 214 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 NFIAQ12857 509 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 SRRDQ9UH36 339 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 CPA4Q9UI42 421 aa23.3■■□□□ 1.32
NME3-204ENST00000563498 HOXD10P28358 340 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 MOGSQ13724 837 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 ATP2B3Q16720 1220 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 CEP126Q9P2H0 1117 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 FAM198AQ9UFP1 575 aa23.29■■□□□ 1.32
NME3-204ENST00000563498 CXCL11O14625 94 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 MYCP01106 439 aaPredicted RBP23.28■■□□□ 1.32
NME3-204ENST00000563498 CTGFP29279 349 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 PSMC4P43686 418 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 TRIM47Q96LD4 638 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 USP40Q9NVE5 1235 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 DENND2AQ9ULE3 1009 aa23.28■■□□□ 1.32
NME3-204ENST00000563498 UBTFL1P0CB47 393 aaPredicted RBP23.27■■□□□ 1.32
NME3-204ENST00000563498 OSBPP22059 807 aa23.26■■□□□ 1.31
NME3-204ENST00000563498 IL15P40933 162 aaPredicted RBP23.26■■□□□ 1.31
NME3-204ENST00000563498 FXR1P51114 621 aaKnown RBP eCLIP23.26■■□□□ 1.31
NME3-204ENST00000563498 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
NME3-204ENST00000563498 SIL1Q9H173 461 aa23.26■■□□□ 1.31
NME3-204ENST00000563498 SMC4Q9NTJ3 1288 aa23.26■■□□□ 1.31
NME3-204ENST00000563498 HDAC5Q9UQL6 1122 aa23.26■■□□□ 1.31
NME3-204ENST00000563498 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
NME3-204ENST00000563498 AK9Q5TCS8 1911 aa23.25■■□□□ 1.31
NME3-204ENST00000563498 FMNL1O95466 1100 aaPredicted RBP23.25■■□□□ 1.31
NME3-204ENST00000563498 ZGPATQ8N5A5 531 aaKnown RBP23.25■■□□□ 1.31
NME3-204ENST00000563498 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
NME3-204ENST00000563498 COLQQ9Y215 455 aaPredicted RBP23.25■■□□□ 1.31
NME3-204ENST00000563498 PHF20L1A8MW92 1017 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 ENTPD3O75355 529 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 GRK4P32298 578 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 GPAT2Q6NUI2 795 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 RAET1EQ8TD07 263 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 MYPNQ86TC9 1320 aa23.24■■□□□ 1.31
NME3-204ENST00000563498 BCRP11274 1271 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 PHKA1P46020 1223 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 MTFR1Q15390 333 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
NME3-204ENST00000563498 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 SCYL3Q8IZE3 742 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 SHISA4Q96DD7 197 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 DOCK2Q92608 1830 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 GAKO14976 1311 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
NME3-204ENST00000563498 RFX7Q2KHR2 1363 aa23.23■■□□□ 1.31
NME3-204ENST00000563498 H0YGN5 161 aa23.22■■□□□ 1.31
NME3-204ENST00000563498 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
NME3-204ENST00000563498 RGS3P49796 1198 aa23.22■■□□□ 1.31
NME3-204ENST00000563498 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
NME3-204ENST00000563498 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
NME3-204ENST00000563498 A0A0G2JLL6 359 aaPredicted RBP23.21■■□□□ 1.31
NME3-204ENST00000563498 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
NME3-204ENST00000563498 FCGRTP55899 365 aa23.21■■□□□ 1.31
NME3-204ENST00000563498 CCDC102BQ68D86 513 aa23.21■■□□□ 1.31
NME3-204ENST00000563498 PRRT2Q7Z6L0 340 aaPredicted RBP23.21■■□□□ 1.31
NME3-204ENST00000563498 PICK1Q9NRD5 415 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms