RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 INPP5BP32019 993 aa20.98■□□□□ 0.95
HDGFL3-203ENST00000563404 NFIAQ12857 509 aa20.98■□□□□ 0.95
HDGFL3-203ENST00000563404 CDC42EP5Q6NZY7 148 aa20.98■□□□□ 0.95
HDGFL3-203ENST00000563404 FAM151AQ8WW52 585 aa20.98■□□□□ 0.95
HDGFL3-203ENST00000563404 RBBP6Q7Z6E9 1792 aaKnown RBP20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 CETPP11597 493 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 EN2P19622 333 aaPredicted RBP20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 PPIL2Q13356 520 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 ATP2B3Q16720 1220 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 HOOK2Q96ED9 719 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 ZNF341Q9BYN7 854 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 ARHGAP39Q9C0H5 1083 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 PA2G4Q9UQ80 394 aaKnown RBP20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 PTCH2Q9Y6C5 1203 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 ZSWIM8A7E2V4 1837 aa20.97■□□□□ 0.95
HDGFL3-203ENST00000563404 TLR2O60603 784 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 PHKA1P46020 1223 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 TCP10Q12799 353 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 SNAPC2Q13487 334 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 DCAF15Q66K64 600 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 ZNF333Q96JL9 665 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 CEP126Q9P2H0 1117 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 FAM198AQ9UFP1 575 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 ZNF112Q9UJU3 913 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 KIAA0100Q14667 2235 aaKnown RBP20.96■□□□□ 0.95
HDGFL3-203ENST00000563404 ADORA1P30542 326 aa20.95■□□□□ 0.94
HDGFL3-203ENST00000563404 ZFPM1Q8IX07 1006 aa20.95■□□□□ 0.94
HDGFL3-203ENST00000563404 ZCCHC17Q9NP64 241 aaKnown RBP20.95■□□□□ 0.94
HDGFL3-203ENST00000563404 PPATQ06203 517 aa20.94■□□□□ 0.94
HDGFL3-203ENST00000563404 MEIS3Q99687 375 aa20.94■□□□□ 0.94
HDGFL3-203ENST00000563404 SALL1Q9NSC2 1324 aa20.94■□□□□ 0.94
HDGFL3-203ENST00000563404 LDHBP07195 334 aaKnown RBP20.93■□□□□ 0.94
HDGFL3-203ENST00000563404 IL15P40933 162 aaPredicted RBP20.93■□□□□ 0.94
HDGFL3-203ENST00000563404 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
HDGFL3-203ENST00000563404 USP40Q9NVE5 1235 aa20.93■□□□□ 0.94
HDGFL3-203ENST00000563404 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 MOGSQ13724 837 aa20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 API5Q9BZZ5 524 aaKnown RBP20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 COPRSQ9NQ92 184 aa20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 DENND2AQ9ULE3 1009 aa20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 KCNH4Q9UQ05 1017 aa20.92■□□□□ 0.94
HDGFL3-203ENST00000563404 CTGFP29279 349 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 ARHGEF6Q15052 776 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 SLC9C1Q4G0N8 1177 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 ATRNL1Q5VV63 1379 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 CCDC102BQ68D86 513 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 C17orf99Q6UX52 265 aa20.91■□□□□ 0.94
HDGFL3-203ENST00000563404 ADGRA2Q96PE1 1338 aa20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 SEMA3EO15041 775 aa20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 ZBTB22O15209 634 aa20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 TIMM10P62072 90 aa20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 NOL9Q5SY16 702 aaKnown RBP20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 CPA4Q9UI42 421 aa20.9■□□□□ 0.94
HDGFL3-203ENST00000563404 RFX7Q2KHR2 1363 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 ECM2O94769 699 aaPredicted RBP20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 RARSP54136 660 aaKnown RBP20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 RASGRF1Q13972 1273 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 SH3BP5LQ7L8J4 393 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 ANKRD23Q86SG2 305 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 SH3TC2Q8TF17 1288 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 PCDH10Q9P2E7 1040 aa20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
HDGFL3-203ENST00000563404 GAKO14976 1311 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 PHF20L1A8MW92 1017 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 PDHXO00330 501 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 WDHD1O75717 1129 aaPredicted RBP20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 MYCP01106 439 aaPredicted RBP20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 NBPF11Q86T75 865 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
HDGFL3-203ENST00000563404 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
HDGFL3-203ENST00000563404 RGS3P49796 1198 aa20.87■□□□□ 0.93
HDGFL3-203ENST00000563404 KIF22Q14807 665 aa20.87■□□□□ 0.93
HDGFL3-203ENST00000563404 IDI2Q9BXS1 227 aa20.87■□□□□ 0.93
HDGFL3-203ENST00000563404 MYH2Q9UKX2 1941 aa20.86■□□□□ 0.93
HDGFL3-203ENST00000563404 TFCP2Q12800 502 aa20.86■□□□□ 0.93
HDGFL3-203ENST00000563404 GPAT2Q6NUI2 795 aa20.86■□□□□ 0.93
HDGFL3-203ENST00000563404 TRIM47Q96LD4 638 aa20.86■□□□□ 0.93
HDGFL3-203ENST00000563404 DDX4Q9NQI0 724 aaKnown RBP20.86■□□□□ 0.93
HDGFL3-203ENST00000563404 A0A1B0GUL7 405 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 ENTPD3O75355 529 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 GNRH1P01148 92 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 SLC4A8Q2Y0W8 1093 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 ZNF384Q8TF68 577 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 XAGE2Q96GT9 111 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 HDAC5Q9UQL6 1122 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 TNNQ9UQP3 1299 aa20.85■□□□□ 0.93
HDGFL3-203ENST00000563404 PDS5AQ29RF7 1337 aaKnown RBP20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 DDTLA6NHG4 134 aaPredicted RBP20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 SRGAP3O43295 1099 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 PSMC4P43686 418 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 MAP3K10Q02779 954 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 MTX1Q13505 466 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 ZGPATQ8N5A5 531 aaKnown RBP20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
HDGFL3-203ENST00000563404 FAM163AQ96GL9 167 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms