RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ABCD1P33897 745 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 CCDC15Q0P6D6 951 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 ERFEQ4G0M1 354 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 PLBD1Q6P4A8 553 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 CCDC129Q6ZRS4 1044 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 CELF2-AS1Q8N7Q2 184 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 IKBKGQ9Y6K9 419 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 CEP170Q5SW79 1584 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 ERBB4Q15303 1308 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 HNRNPCP07910 306 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMG1-207ENST00000563235 IDEP14735 1019 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 GUCY2FP51841 1108 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 TCIRG1Q13488 830 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 GPATCH4Q5T3I0 446 aaKnown RBP5.62□□□□□ -1.51
SMG1-207ENST00000563235 KLHL10Q6JEL2 608 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 CCBE1Q6UXH8 406 aaPredicted RBP5.62□□□□□ -1.51
SMG1-207ENST00000563235 HERPUD2Q9BSE4 406 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 GGT7Q9UJ14 662 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 TMX2Q9Y320 296 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 hCG_1642624A0A1W2PR95 340 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 GPR182O15218 404 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 ST18O60284 1047 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 RAC2P15153 192 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 PLA2G4AP47712 749 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 RXRGP48443 463 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 UBASH3AP57075 661 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 APOBRQ0VD83 1088 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 PIN1Q13526 163 aaPredicted RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 MZT2AQ6P582 158 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 PLEKHM2Q8IWE5 1019 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 TRPM4Q8TD43 1214 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 STON2Q8WXE9 905 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 NUDT12Q9BQG2 462 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 POLR3CQ9BUI4 534 aaPredicted RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 VPS33BQ9H267 617 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 PLCB1Q9NQ66 1216 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 SMC4Q9NTJ3 1288 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 CEP72Q9P209 647 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 TRIM27P14373 513 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 STAT3P40763 770 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 ECE1P42892 770 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 GTF2A2P52657 109 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 NFKB2Q00653 900 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 MTMR1Q13613 665 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 HLTFQ14527 1009 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMG1-207ENST00000563235 COBLL1Q53SF7 1204 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 ZC3H12BQ5HYM0 836 aaKnown RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 XRRA1Q6P2D8 792 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 RSRC2Q7L4I2 434 aaKnown RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 TCEAL8Q8IYN2 117 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 STK11IPQ8N1F8 1099 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 WDR66Q8TBY9 1149 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 HOOK2Q96ED9 719 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 STRBPQ96SI9 672 aaKnown RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 PRKD2Q9BZL6 878 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 KIAA1024Q9UPX6 916 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 FAM50BQ9Y247 325 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 DGKBQ9Y6T7 804 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 ARIH2O95376 493 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 IL33O95760 270 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 BCAMP50895 628 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 APBA1Q02410 837 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 CHAF1AQ13111 956 aaPredicted RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 NBPF8Q3BBV2 869 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 DNTTIP2Q5QJE6 756 aaKnown RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 FAM102BQ5T8I3 360 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 CYP26C1Q6V0L0 522 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 PJA1Q8NG27 643 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 CRELD1Q96HD1 420 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 COPRSQ9NQ92 184 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 DIAPH3Q9NSV4 1193 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 HOXC10Q9NYD6 342 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 TPCN1Q9ULQ1 816 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 NOD1Q9Y239 953 aa5.61□□□□□ -1.51
SMG1-207ENST00000563235 V9GY48 417 aaPredicted RBP5.61□□□□□ -1.51
SMG1-207ENST00000563235 TSPOAP1O95153 1857 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 STK3Q13188 491 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 PICALMQ13492 652 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 SLMAPQ14BN4 828 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 HSP90B2PQ58FF3 399 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 DACT2Q5SW24 774 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 CPLX2Q6PUV4 134 aaKnown RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 NKX2-3Q8TAU0 364 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 TMC1Q8TDI8 760 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 N4BP2L2Q92802 583 aaPredicted RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 ATG3Q9NT62 314 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 OBP2AQ9NY56 170 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 ITM2BQ9Y287 266 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 SYNDIG1LA6NDD5 238 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 TRIM37O94972 964 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 MTHFD1P11586 935 aaKnown RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 SLC5A1P13866 664 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 XBP1P17861 261 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 KIF5BP33176 963 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 MRE11P49959 708 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 BIRC3Q13489 604 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms