RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 WNK4Q96J92 1243 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 SEMA3EO15041 775 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 MCAMP43121 646 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 TTC39AQ5SRH9 613 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
NSMCE1-203ENST00000562039 CA12O43570 354 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 BTDP43251 543 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 MECOMQ03112 1051 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 PICALMQ13492 652 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 DGKZQ13574 1117 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 ZKSCAN4Q969J2 545 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 MYH2Q9UKX2 1941 aa11.66□□□□□ -0.54
NSMCE1-203ENST00000562039 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 RGS3P49796 1198 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 MAP3K9P80192 1104 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 VGLL4Q14135 290 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 MAP3K11Q16584 847 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 OPTNQ96CV9 577 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 ABHD8Q96I13 439 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 WRNIP1Q96S55 665 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
NSMCE1-203ENST00000562039 CCDC85CA6NKD9 419 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 IGF2BP3O00425 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 ARID4AP29374 1257 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 INPP5BP32019 993 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 ZAP70P43403 619 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 CCDC158Q5M9N0 1113 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 AACSQ86V21 672 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 FAM151AQ8WW52 585 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
NSMCE1-203ENST00000562039 MROH7-TTC4A0A0A0MT08 1334 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 MS4A1P11836 297 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 TM4SF4P48230 202 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 FAM83AQ86UY5 434 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 SAGE1Q9NXZ1 904 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 CSADQ9Y600 493 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 SNCAIPQ9Y6H5 919 aa11.63□□□□□ -0.55
NSMCE1-203ENST00000562039 GAKO14976 1311 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 DDTLA6NHG4 134 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 MANSC4A6NHS7 340 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 CYP2E1P05181 493 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 SLC4A8Q2Y0W8 1093 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 PTPN18Q99952 460 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
NSMCE1-203ENST00000562039 MYO5AQ9Y4I1 1855 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 GPR25O00155 361 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 ADGRA1Q86SQ6 560 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 BRI3BPQ8WY22 251 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 ANTXR1Q9H6X2 564 aa11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 AATFQ9NY61 560 aaKnown RBP eCLIP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-203ENST00000562039 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-203ENST00000562039 GPR75-ASB3A0A0A6YYF3 556 aa11.6□□□□□ -0.55
NSMCE1-203ENST00000562039 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
NSMCE1-203ENST00000562039 SMARCA5O60264 1052 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-203ENST00000562039 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-203ENST00000562039 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms