RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 ZNF512BQ96KM6 892 aaPredicted RBP13.72□□□□□ -0.21
PCAT1-202ENST00000561978 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
PCAT1-202ENST00000561978 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 SNAP23O00161 211 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 CYP21A2P08686 494 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 CCDC129Q6ZRS4 1044 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 CTNNA3Q9UI47 895 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 LTBP3Q9NS15 1303 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 LTBP1Q14766 1721 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 UFL1O94874 794 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.21
PCAT1-202ENST00000561978 AOC3Q16853 763 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 TBC1D16Q8TBP0 767 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 XDHP47989 1333 aa13.71□□□□□ -0.21
PCAT1-202ENST00000561978 RIMBP2O15034 1052 aa13.71□□□□□ -0.22
PCAT1-202ENST00000561978 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.22
PCAT1-202ENST00000561978 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.22
PCAT1-202ENST00000561978 USP48Q86UV5 1035 aa13.71□□□□□ -0.22
PCAT1-202ENST00000561978 FAM43AQ8N2R8 423 aa13.71□□□□□ -0.22
PCAT1-202ENST00000561978 RTFDC1Q9BY42 306 aaPredicted RBP13.71□□□□□ -0.22
PCAT1-202ENST00000561978 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCAT1-202ENST00000561978 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
PCAT1-202ENST00000561978 COL4A5P29400 1685 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
PCAT1-202ENST00000561978 TTF1Q15361 905 aaPredicted RBP13.7□□□□□ -0.22
PCAT1-202ENST00000561978 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 DHX32Q7L7V1 743 aaKnown RBP13.7□□□□□ -0.22
PCAT1-202ENST00000561978 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 NECAB1Q8N987 351 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 GGA1Q9UJY5 639 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 MTMR6Q9Y217 621 aa13.7□□□□□ -0.22
PCAT1-202ENST00000561978 PDE8BO95263 885 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 YY1P25490 414 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 ADORA1P30542 326 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
PCAT1-202ENST00000561978 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 LRSAM1Q6UWE0 723 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 Q6ZUG5 572 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 MAST3O60307 1309 aa13.69□□□□□ -0.22
PCAT1-202ENST00000561978 A0A1B0GUL6 1792 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 TIAM2Q8IVF5 1701 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
PCAT1-202ENST00000561978 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 KLRK1P26718 216 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 UBE2HP62256 183 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 SUPT20HQ8NEM7 779 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
PCAT1-202ENST00000561978 APPBP2Q92624 585 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 LLPHQ9BRT6 129 aaKnown RBP13.68□□□□□ -0.22
PCAT1-202ENST00000561978 ANKRD2Q9GZV1 360 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
PCAT1-202ENST00000561978 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 CHGBP05060 677 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 TXNRD3Q86VQ6 643 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 ZC3H12CQ9C0D7 883 aaKnown RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 ZAP70P43403 619 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 PUM3Q15397 648 aaKnown RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 VGLL2Q8N8G2 317 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 LPIN2Q92539 896 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
PCAT1-202ENST00000561978 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
PCAT1-202ENST00000561978 E7EWF7 191 aa13.66□□□□□ -0.22
PCAT1-202ENST00000561978 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
PCAT1-202ENST00000561978 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
PCAT1-202ENST00000561978 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
PCAT1-202ENST00000561978 FBXL16Q8N461 479 aa13.66□□□□□ -0.22
PCAT1-202ENST00000561978 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
PCAT1-202ENST00000561978 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
PCAT1-202ENST00000561978 M0R2C6 588 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
PCAT1-202ENST00000561978 EYA3Q99504 573 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 GDPD2Q9HCC8 539 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 TCHHQ07283 1943 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 SYCE3A1L190 88 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 PFKFB2O60825 505 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms