RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 RXRAP19793 462 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
NEIL1-202ENST00000561643 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
NEIL1-202ENST00000561643 SHANK3Q9BYB0 1731 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 A0A0G2JS52 829 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 PDE8BO95263 885 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 PHKA1P46020 1223 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 GNL2Q13823 731 aaKnown RBP12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ARID5BQ14865 1188 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
NEIL1-202ENST00000561643 KIF18AQ8NI77 898 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 TOGARAM1Q9Y4F4 1720 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 UBE3CQ15386 1083 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 ZMYM6O95789 1325 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 B4E1Z4 1266 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 NEMFO60524 1076 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 CDKL5O76039 1030 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 CYB5R4Q7L1T6 521 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 MORC2Q9Y6X9 1032 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 BIN1O00499 593 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 PDE8AO60658 829 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 ADAMTS2O95450 1211 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 PDE6AP16499 860 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 DPCR1Q3MIW9 517 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-202ENST00000561643 BTG4Q9NY30 223 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
NEIL1-202ENST00000561643 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
NEIL1-202ENST00000561643 ZNF202O95125 648 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
NEIL1-202ENST00000561643 EP400NLQ6ZTU2 488 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 KRT222Q8N1A0 295 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
NEIL1-202ENST00000561643 SKILP12757 684 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
NEIL1-202ENST00000561643 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 PHKBQ93100 1093 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
NEIL1-202ENST00000561643 SMTNL1A8MU46 457 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 PFKFB1P16118 471 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 PUM3Q15397 648 aaKnown RBP12.67□□□□□ -0.38
NEIL1-202ENST00000561643 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 DZIP3Q86Y13 1208 aaKnown RBP12.67□□□□□ -0.38
NEIL1-202ENST00000561643 SLC4A9Q96Q91 983 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 ZBTB43O43298 467 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 SMC2O95347 1197 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 CMA1P23946 247 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
NEIL1-202ENST00000561643 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
NEIL1-202ENST00000561643 KRT40Q6A162 431 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 CCDC112Q8NEF3 446 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 LPIN2Q92539 896 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
NEIL1-202ENST00000561643 ATRNO75882 1429 aa12.67□□□□□ -0.38
NEIL1-202ENST00000561643 TPM4P67936 248 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 TRIM29Q14134 588 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 TMEM67Q5HYA8 995 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 MYH7P12883 1935 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 NEDD4P46934 1319 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 GOLGA8AA7E2F4 631 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 CDC27P30260 824 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
NEIL1-202ENST00000561643 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
NEIL1-202ENST00000561643 MYL10Q9BUA6 226 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 NAPBQ9H115 298 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 PAXBP1Q9Y5B6 917 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-202ENST00000561643 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
NEIL1-202ENST00000561643 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 JMYQ8N9B5 988 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 INCENPQ9NQS7 918 aa12.66□□□□□ -0.38
NEIL1-202ENST00000561643 MROH7-TTC4A0A0A0MT08 1334 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 SLC5A1P13866 664 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 SYKP43405 635 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms