RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 DBNDD2Q9BQY9 259 aa29.3■■■□□ 2.28
CDR2-202ENST00000561630 SAGE1Q9NXZ1 904 aa29.3■■■□□ 2.28
CDR2-202ENST00000561630 GAKO14976 1311 aa29.29■■■□□ 2.28
CDR2-202ENST00000561630 MCAMP43121 646 aa29.29■■■□□ 2.28
CDR2-202ENST00000561630 CLMNQ96JQ2 1002 aa29.29■■■□□ 2.28
CDR2-202ENST00000561630 RNF186Q9NXI6 227 aa29.29■■■□□ 2.28
CDR2-202ENST00000561630 CCDC158Q5M9N0 1113 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 SPRYD7Q5W111 196 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 ERICH6Q7L0X2 663 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 ERC1Q8IUD2 1116 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 SLF2Q8IX21 1173 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 FAM163AQ96GL9 167 aaPredicted RBP29.28■■■□□ 2.28
CDR2-202ENST00000561630 EXOC6BQ9Y2D4 811 aa29.28■■■□□ 2.28
CDR2-202ENST00000561630 ANKRD13AQ8IZ07 590 aa29.27■■■□□ 2.28
CDR2-202ENST00000561630 USP40Q9NVE5 1235 aa29.27■■■□□ 2.28
CDR2-202ENST00000561630 MECOMQ03112 1051 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 MKRN3Q13064 507 aaKnown RBP29.26■■■□□ 2.27
CDR2-202ENST00000561630 HSP90AB4PQ58FF6 505 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 TTC39AQ5SRH9 613 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 TBC1D9Q6ZT07 1266 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 SIRT2Q8IXJ6 389 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 FAM151AQ8WW52 585 aa29.26■■■□□ 2.27
CDR2-202ENST00000561630 EAF2Q96CJ1 260 aaPredicted RBP29.26■■■□□ 2.27
CDR2-202ENST00000561630 ZNF512BQ96KM6 892 aaPredicted RBP29.26■■■□□ 2.27
CDR2-202ENST00000561630 DBNLQ9UJU6 430 aaKnown RBP29.26■■■□□ 2.27
CDR2-202ENST00000561630 RPAP1Q9BWH6 1393 aaPredicted RBP29.26■■■□□ 2.27
CDR2-202ENST00000561630 HMMRO75330 724 aa29.25■■■□□ 2.27
CDR2-202ENST00000561630 TRPA1O75762 1119 aa29.25■■■□□ 2.27
CDR2-202ENST00000561630 TM4SF4P48230 202 aa29.25■■■□□ 2.27
CDR2-202ENST00000561630 HOOK2Q96ED9 719 aa29.25■■■□□ 2.27
CDR2-202ENST00000561630 ZBTB48P10074 688 aaPredicted RBP29.24■■■□□ 2.27
CDR2-202ENST00000561630 NFIAQ12857 509 aa29.24■■■□□ 2.27
CDR2-202ENST00000561630 ZNF384Q8TF68 577 aa29.24■■■□□ 2.27
CDR2-202ENST00000561630 CCDC8Q9H0W5 538 aaPredicted RBP29.24■■■□□ 2.27
CDR2-202ENST00000561630 TLR7Q9NYK1 1049 aaKnown RBP29.24■■■□□ 2.27
CDR2-202ENST00000561630 WNK4Q96J92 1243 aa29.23■■■□□ 2.27
CDR2-202ENST00000561630 FAM198AQ9UFP1 575 aa29.23■■■□□ 2.27
CDR2-202ENST00000561630 MROH7-TTC4A0A0A0MT08 1334 aa29.22■■■□□ 2.27
CDR2-202ENST00000561630 SREBF2Q12772 1141 aa29.22■■■□□ 2.27
CDR2-202ENST00000561630 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.22■■■□□ 2.27
CDR2-202ENST00000561630 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.22■■■□□ 2.27
CDR2-202ENST00000561630 NSUN4Q96CB9 384 aaKnown RBP29.22■■■□□ 2.27
CDR2-202ENST00000561630 SNRKQ9NRH2 765 aa29.22■■■□□ 2.27
CDR2-202ENST00000561630 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.22■■■□□ 2.27
CDR2-202ENST00000561630 GSTO1P78417 241 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 MAP3K9P80192 1104 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 TCP10Q12799 353 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 RHPN1Q8TCX5 695 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 IDI2Q9BXS1 227 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 RAI14Q9P0K7 980 aa29.21■■■□□ 2.27
CDR2-202ENST00000561630 GPR75-ASB3A0A0A6YYF3 556 aa29.2■■■□□ 2.26
CDR2-202ENST00000561630 BTDP43251 543 aa29.2■■■□□ 2.26
CDR2-202ENST00000561630 LRP2BPQ9P2M1 347 aa29.2■■■□□ 2.26
CDR2-202ENST00000561630 MANSC4A6NHS7 340 aaPredicted RBP29.19■■■□□ 2.26
CDR2-202ENST00000561630 LDHCP07864 332 aa29.19■■■□□ 2.26
CDR2-202ENST00000561630 VGLL4Q14135 290 aa29.19■■■□□ 2.26
CDR2-202ENST00000561630 DCAF15Q66K64 600 aa29.19■■■□□ 2.26
CDR2-202ENST00000561630 AACSQ86V21 672 aa29.19■■■□□ 2.26
CDR2-202ENST00000561630 ELP3Q9H9T3 547 aa29.19■■■□□ 2.26
CDR2-202ENST00000561630 RFX7Q2KHR2 1363 aa29.18■■■□□ 2.26
CDR2-202ENST00000561630 CYP2E1P05181 493 aaPredicted RBP29.18■■■□□ 2.26
CDR2-202ENST00000561630 GJA5P36382 358 aa29.18■■■□□ 2.26
CDR2-202ENST00000561630 INHBEP58166 350 aa29.18■■■□□ 2.26
CDR2-202ENST00000561630 KIF1BPQ96EK5 621 aa29.18■■■□□ 2.26
CDR2-202ENST00000561630 YTHDC1Q96MU7 727 aaKnown RBP29.18■■■□□ 2.26
CDR2-202ENST00000561630 ENTPD3O75355 529 aa29.17■■■□□ 2.26
CDR2-202ENST00000561630 WDHD1O75717 1129 aaPredicted RBP29.17■■■□□ 2.26
CDR2-202ENST00000561630 RGS3P49796 1198 aa29.17■■■□□ 2.26
CDR2-202ENST00000561630 ZFPM1Q8IX07 1006 aa29.17■■■□□ 2.26
CDR2-202ENST00000561630 IL1RAPL2Q9NP60 686 aa29.17■■■□□ 2.26
CDR2-202ENST00000561630 CSADQ9Y600 493 aa29.17■■■□□ 2.26
CDR2-202ENST00000561630 ZAP70P43403 619 aa29.16■■■□□ 2.26
CDR2-202ENST00000561630 RHBDL3P58872 404 aa29.16■■■□□ 2.26
CDR2-202ENST00000561630 MIGA2Q7L4E1 593 aa29.16■■■□□ 2.26
CDR2-202ENST00000561630 OPTNQ96CV9 577 aa29.16■■■□□ 2.26
CDR2-202ENST00000561630 WRNIP1Q96S55 665 aa29.16■■■□□ 2.26
CDR2-202ENST00000561630 IGSF3O75054 1194 aa29.15■■■□□ 2.26
CDR2-202ENST00000561630 RAB11FIP3O75154 756 aa29.15■■■□□ 2.26
CDR2-202ENST00000561630 MAP4K4O95819 1239 aaPredicted RBP29.15■■■□□ 2.26
CDR2-202ENST00000561630 ZNF341Q9BYN7 854 aa29.15■■■□□ 2.26
CDR2-202ENST00000561630 MYH2Q9UKX2 1941 aa29.14■■■□□ 2.26
CDR2-202ENST00000561630 APBB1O00213 710 aa29.14■■■□□ 2.26
CDR2-202ENST00000561630 CLASRPQ8N2M8 674 aaKnown RBP29.14■■■□□ 2.26
CDR2-202ENST00000561630 CNKSR2Q8WXI2 1034 aa29.13■■■□□ 2.25
CDR2-202ENST00000561630 ZKSCAN4Q969J2 545 aaPredicted RBP29.13■■■□□ 2.25
CDR2-202ENST00000561630 DDX4Q9NQI0 724 aaKnown RBP29.13■■■□□ 2.25
CDR2-202ENST00000561630 SNCAIPQ9Y6H5 919 aa29.13■■■□□ 2.25
CDR2-202ENST00000561630 NPM3O75607 178 aaKnown RBP29.12■■■□□ 2.25
CDR2-202ENST00000561630 ALDH1A1P00352 501 aa29.12■■■□□ 2.25
CDR2-202ENST00000561630 NAA16Q6N069 864 aaPredicted RBP29.12■■■□□ 2.25
CDR2-202ENST00000561630 IFNL1Q8IU54 200 aa29.12■■■□□ 2.25
CDR2-202ENST00000561630 CFHR5Q9BXR6 569 aa29.12■■■□□ 2.25
CDR2-202ENST00000561630 PIH1D3Q9NQM4 214 aaKnown RBP29.12■■■□□ 2.25
CDR2-202ENST00000561630 ZNF112Q9UJU3 913 aa29.12■■■□□ 2.25
CDR2-202ENST00000561630 OTOFQ9HC10 1997 aa29.12■■■□□ 2.25
CDR2-202ENST00000561630 SPDYE5A6NIY4 337 aa29.11■■■□□ 2.25
CDR2-202ENST00000561630 TBC1D8O95759 1140 aa29.11■■■□□ 2.25
CDR2-202ENST00000561630 SH3BP5LQ7L8J4 393 aa29.11■■■□□ 2.25
CDR2-202ENST00000561630 AKAP11Q9UKA4 1901 aa29.11■■■□□ 2.25
CDR2-202ENST00000561630 ATRNL1Q5VV63 1379 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms