RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
HERC1-212ENST00000561348 MECOMQ03112 1051 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 NBPF12Q5TAG4 269 aaPredicted RBP12.37□□□□□ -0.43
HERC1-212ENST00000561348 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 ZDHHC15Q96MV8 337 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 NOL10Q9BSC4 688 aaKnown RBP12.37□□□□□ -0.43
HERC1-212ENST00000561348 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 TMEM39BQ9GZU3 492 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 PICALMQ13492 652 aa12.36□□□□□ -0.43
HERC1-212ENST00000561348 SUPT20HL1Q3ZLR7 823 aa12.36□□□□□ -0.43
HERC1-212ENST00000561348 APOBEC3HQ6NTF7 200 aaKnown RBP12.36□□□□□ -0.43
HERC1-212ENST00000561348 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
HERC1-212ENST00000561348 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
HERC1-212ENST00000561348 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
HERC1-212ENST00000561348 SALL1Q9NSC2 1324 aa12.36□□□□□ -0.43
HERC1-212ENST00000561348 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
HERC1-212ENST00000561348 LDHCP07864 332 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 BTDP43251 543 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 GSTO1P78417 241 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 NAA16Q6N069 864 aaPredicted RBP12.35□□□□□ -0.43
HERC1-212ENST00000561348 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 CDAN1Q8IWY9 1227 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 AIDAQ96BJ3 306 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
HERC1-212ENST00000561348 ECM29Q5VYK3 1845 aa12.34□□□□□ -0.43
HERC1-212ENST00000561348 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
HERC1-212ENST00000561348 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
HERC1-212ENST00000561348 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
HERC1-212ENST00000561348 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
HERC1-212ENST00000561348 PIH1D3Q9NQM4 214 aaKnown RBP12.34□□□□□ -0.43
HERC1-212ENST00000561348 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
HERC1-212ENST00000561348 GOLIM4O00461 696 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 NFIAQ12857 509 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
HERC1-212ENST00000561348 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
HERC1-212ENST00000561348 PDS5AQ29RF7 1337 aaKnown RBP12.33□□□□□ -0.44
HERC1-212ENST00000561348 CYP7A1P22680 504 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
HERC1-212ENST00000561348 RGS3P49796 1198 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 FKBP1BP68106 108 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 ANKRD45Q5TZF3 282 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 TSHZ3Q63HK5 1081 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 JMYQ8N9B5 988 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 NSUN4Q96CB9 384 aaKnown RBP12.32□□□□□ -0.44
HERC1-212ENST00000561348 EDC3Q96F86 508 aaKnown RBP12.32□□□□□ -0.44
HERC1-212ENST00000561348 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
HERC1-212ENST00000561348 BAG3O95817 575 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
HERC1-212ENST00000561348 MAP3K12Q12852 859 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 MIGA1Q8NAN2 632 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 CLMNQ96JQ2 1002 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 ZNF512BQ96KM6 892 aaPredicted RBP12.31□□□□□ -0.44
HERC1-212ENST00000561348 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
HERC1-212ENST00000561348 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 MAP4K4O95819 1239 aaPredicted RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 DYNLL1P63167 89 aaKnown RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 MAP2K1Q02750 393 aaPredicted RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 NOGQ13253 232 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
HERC1-212ENST00000561348 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 FAM151AQ8WW52 585 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 HHIPL1Q96JK4 782 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 FAM198AQ9UFP1 575 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 GAKO14976 1311 aa12.3□□□□□ -0.44
HERC1-212ENST00000561348 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 GPR75-ASB3A0A0A6YYF3 556 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 SLC10A3P09131 477 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 MAP2K2P36507 400 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 TTF1Q15361 905 aaPredicted RBP12.29□□□□□ -0.44
HERC1-212ENST00000561348 SLC9C2Q5TAH2 1124 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 TEPSINQ96N21 525 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 CSRNP1Q96S65 589 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
HERC1-212ENST00000561348 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms