RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 MAP2K2P36507 400 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 RARSP54136 660 aaKnown RBP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 LSM11P83369 360 aaKnown RBP eCLIP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 UBE4AQ14139 1066 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 GRIK5Q16478 980 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 RGMBQ6NW40 437 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 POTEEQ6S8J3 1075 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 C2orf69Q8N8R5 385 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 IQSEC3Q9UPP2 1182 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-223ENST00000561304 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
ZEB1-223ENST00000561304 AK9Q5TCS8 1911 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 HTTP42858 3142 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 SLC10A3P09131 477 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 ZNF157P51786 506 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-223ENST00000561304 METTL24Q5JXM2 366 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 MEIS3Q99687 375 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 EPAS1Q99814 870 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 PCDHGA10Q9Y5H3 936 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 CENPFP49454 3210 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 FAM205AQ6ZU69 1335 aa9.29□□□□□ -0.92
ZEB1-223ENST00000561304 DOCK2Q92608 1830 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 CLRN2A0PK11 232 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 PDE8BO95263 885 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 FGFR2P21802 821 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 FKBP1AP62942 108 aaKnown RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 NOGQ13253 232 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 CFAP100Q494V2 611 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 DIEXFQ68CQ4 756 aaKnown RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 ATG9AQ7Z3C6 839 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 MTMR14Q8NCE2 650 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 PRMT6Q96LA8 375 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 HDAC9Q9UKV0 1011 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 TNRC18O15417 2968 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-223ENST00000561304 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
ZEB1-223ENST00000561304 UBE2Q2LH0YL09 131 aa9.27□□□□□ -0.93
ZEB1-223ENST00000561304 BCAR3O75815 825 aa9.27□□□□□ -0.93
ZEB1-223ENST00000561304 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-223ENST00000561304 TRIM27P14373 513 aa9.27□□□□□ -0.93
ZEB1-223ENST00000561304 KIF23Q02241 960 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-223ENST00000561304 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
ZEB1-223ENST00000561304 APOBEC3FQ8IUX4 373 aaKnown RBP9.27□□□□□ -0.93
ZEB1-223ENST00000561304 SIL1Q9H173 461 aa9.27□□□□□ -0.93
ZEB1-223ENST00000561304 PA2G4Q9UQ80 394 aaKnown RBP9.27□□□□□ -0.93
ZEB1-223ENST00000561304 EYA2O00167 538 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 PTPREP23469 700 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 MMP14P50281 582 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 BCAMP50895 628 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 FKBP1BP68106 108 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 CHAF1AQ13111 956 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-223ENST00000561304 PRKG1Q13976 671 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 API5Q9BZZ5 524 aaKnown RBP9.26□□□□□ -0.93
ZEB1-223ENST00000561304 TTF2Q9UNY4 1162 aaKnown RBP9.26□□□□□ -0.93
ZEB1-223ENST00000561304 KIF16BQ96L93 1317 aa9.26□□□□□ -0.93
ZEB1-223ENST00000561304 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
ZEB1-223ENST00000561304 TTLL12Q14166 644 aaPredicted RBP9.25□□□□□ -0.93
ZEB1-223ENST00000561304 PUM3Q15397 648 aaKnown RBP9.25□□□□□ -0.93
ZEB1-223ENST00000561304 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
ZEB1-223ENST00000561304 CCDC102AQ96A19 550 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 KCNK17Q96T54 332 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 DEFB129Q9H1M3 183 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 VEZTQ9HBM0 779 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.25□□□□□ -0.93
ZEB1-223ENST00000561304 MAST2Q6P0Q8 1798 aa9.25□□□□□ -0.93
ZEB1-223ENST00000561304 TK2O00142 265 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CA12O43570 354 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CRKP46108 304 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 RBM5P52756 815 aaKnown RBP eCLIP9.24□□□□□ -0.933e-6■■■■□ 22.2
ZEB1-223ENST00000561304 NBPF12Q5TAG4 269 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ARHGAP45Q92619 1136 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 TDRD3Q9H7E2 651 aaKnown RBP9.24□□□□□ -0.93
ZEB1-223ENST00000561304 RNF186Q9NXI6 227 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ZSWIM8A7E2V4 1837 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 BRCA2P51587 3418 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 FOCADQ5VW36 1801 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 PTPRFP10586 1907 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 TRPA1O75762 1119 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CIAO1O76071 339 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 SLC5A1P13866 664 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 ADORA1P30542 326 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 PSEN2P49810 448 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 CAVIN4Q5BKX8 364 aa9.24□□□□□ -0.93
ZEB1-223ENST00000561304 LDLRAD1Q5T700 205 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms