RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IFIT2P09913 472 aaKnown RBP17.01■□□□□ 0.31
TPM1-230ENST00000561266 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
TPM1-230ENST00000561266 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
TPM1-230ENST00000561266 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
TPM1-230ENST00000561266 CAPNS2Q96L46 248 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 OTOFQ9HC10 1997 aa17■□□□□ 0.31
TPM1-230ENST00000561266 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
TPM1-230ENST00000561266 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
TPM1-230ENST00000561266 AK9Q5TCS8 1911 aa17■□□□□ 0.31
TPM1-230ENST00000561266 FAM155AB1AL88 458 aaPredicted RBP17■□□□□ 0.31
TPM1-230ENST00000561266 BTDP43251 543 aa17■□□□□ 0.31
TPM1-230ENST00000561266 RHBDL3P58872 404 aa17■□□□□ 0.31
TPM1-230ENST00000561266 GRM1Q13255 1194 aa17■□□□□ 0.31
TPM1-230ENST00000561266 TSHZ3Q63HK5 1081 aa17■□□□□ 0.31
TPM1-230ENST00000561266 LRP2BPQ9P2M1 347 aa17■□□□□ 0.31
TPM1-230ENST00000561266 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 GPR75-ASB3A0A0A6YYF3 556 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
TPM1-230ENST00000561266 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
TPM1-230ENST00000561266 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 DDX4Q9NQI0 724 aaKnown RBP16.99■□□□□ 0.31
TPM1-230ENST00000561266 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 RFX7Q2KHR2 1363 aa16.99■□□□□ 0.31
TPM1-230ENST00000561266 USP2O75604 605 aaPredicted RBP16.98■□□□□ 0.31
TPM1-230ENST00000561266 CHGBP05060 677 aa16.98■□□□□ 0.31
TPM1-230ENST00000561266 TCP10Q12799 353 aa16.98■□□□□ 0.31
TPM1-230ENST00000561266 SLFNL1Q499Z3 407 aa16.98■□□□□ 0.31
TPM1-230ENST00000561266 RGMBQ6NW40 437 aa16.98■□□□□ 0.31
TPM1-230ENST00000561266 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
TPM1-230ENST00000561266 WDHD1O75717 1129 aaPredicted RBP16.97■□□□□ 0.31
TPM1-230ENST00000561266 ATP5JP18859 108 aa16.97■□□□□ 0.31
TPM1-230ENST00000561266 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
TPM1-230ENST00000561266 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
TPM1-230ENST00000561266 SH3BP5LQ7L8J4 393 aa16.97■□□□□ 0.31
TPM1-230ENST00000561266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.97■□□□□ 0.31
TPM1-230ENST00000561266 CLMNQ96JQ2 1002 aa16.97■□□□□ 0.31
TPM1-230ENST00000561266 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
TPM1-230ENST00000561266 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 MYH7P12883 1935 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 GOLIM4O00461 696 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 IDH1O75874 414 aaKnown RBP16.96■□□□□ 0.31
TPM1-230ENST00000561266 RGS3P49796 1198 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
TPM1-230ENST00000561266 TNFAIP1Q13829 316 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
TPM1-230ENST00000561266 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
TPM1-230ENST00000561266 FAM83AQ86UY5 434 aa16.96■□□□□ 0.31
TPM1-230ENST00000561266 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
TPM1-230ENST00000561266 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
TPM1-230ENST00000561266 FKBP1BP68106 108 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 MAP3K11Q16584 847 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 SH3RF3Q8TEJ3 882 aaPredicted RBP16.95■□□□□ 0.3
TPM1-230ENST00000561266 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 HAUS7Q99871 368 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 IDI2Q9BXS1 227 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
TPM1-230ENST00000561266 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
TPM1-230ENST00000561266 LDHCP07864 332 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 SLC10A3P09131 477 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 CYP7A1P22680 504 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 NF2P35240 595 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 TNNI2P48788 182 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 GSTO1P78417 241 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 MAGEB6Q8N7X4 407 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
TPM1-230ENST00000561266 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
TPM1-230ENST00000561266 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
TPM1-230ENST00000561266 ECE1P42892 770 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 PICALMQ13492 652 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 AAMPQ13685 434 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 PAG1Q9NWQ8 432 aa16.93■□□□□ 0.3
TPM1-230ENST00000561266 ATRNL1Q5VV63 1379 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
TPM1-230ENST00000561266 TCRBV5S4A2TA0A5A2 114 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
TPM1-230ENST00000561266 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
TPM1-230ENST00000561266 PDE6AP16499 860 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 GJA5P36382 358 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 PPP4CP60510 307 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.92■□□□□ 0.3
TPM1-230ENST00000561266 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
TPM1-230ENST00000561266 ENTPD3O75355 529 aa16.91■□□□□ 0.3
TPM1-230ENST00000561266 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
TPM1-230ENST00000561266 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
TPM1-230ENST00000561266 MKRN3Q13064 507 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms