RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 EXOC6BQ9Y2D4 811 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 AKAP2Q9Y2D5 859 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 RPAP1Q9BWH6 1393 aaPredicted RBP15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 TCP10Q12799 353 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 TNFAIP1Q13829 316 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 MRIQ9BWK5 157 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 ABCF2Q9UG63 623 aa15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 DBNLQ9UJU6 430 aaKnown RBP15.64■□□□□ 0.09
CHRNA3-208ENST00000561128 MECOMQ03112 1051 aa15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 VGLL4Q14135 290 aa15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 SPATA5Q8NB90 893 aa15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 EAF2Q96CJ1 260 aaPredicted RBP15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 ELP3Q9H9T3 547 aa15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 DDX4Q9NQI0 724 aaKnown RBP15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 ZBTB40Q9NUA8 1239 aa15.63■□□□□ 0.09
CHRNA3-208ENST00000561128 SIPA1L1O43166 1804 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 IGF2BP3O00425 579 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 CA12O43570 354 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 OS9Q13438 667 aaPredicted RBP15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 SAGE1Q9NXZ1 904 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 NDUFB9Q9Y6M9 179 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 MROH7-TTC4A0A0A0MT08 1334 aa15.62■□□□□ 0.09
CHRNA3-208ENST00000561128 CDK5RAP2Q96SN8 1893 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 PPP1R12BO60237 982 aaPredicted RBP15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 TBC1D8O95759 1140 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 RHBDL3P58872 404 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 FAM83AQ86UY5 434 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 DZIP1Q86YF9 867 aaKnown RBP15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 GPR108Q9NPR9 543 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 USP40Q9NVE5 1235 aa15.61■□□□□ 0.09
CHRNA3-208ENST00000561128 WDHD1O75717 1129 aaPredicted RBP15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 INPP5BP32019 993 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 BTDP43251 543 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 IREB2P48200 963 aaKnown RBP15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 TM4SF4P48230 202 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 TNNI2P48788 182 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 OPTNQ96CV9 577 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 IL1RAPL2Q9NP60 686 aa15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
CHRNA3-208ENST00000561128 CYP2E1P05181 493 aaPredicted RBP15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 ZAP70P43403 619 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 RGS3P49796 1198 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 GORABQ5T7V8 394 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 FAM151AQ8WW52 585 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 ZKSCAN4Q969J2 545 aaPredicted RBP15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 PTPN18Q99952 460 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 TMOD2Q9NZR1 351 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 ZSWIM8A7E2V4 1837 aa15.59■□□□□ 0.09
CHRNA3-208ENST00000561128 APBB1O00213 710 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 CAP1Q01518 475 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 TTC39AQ5SRH9 613 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 ABHD8Q96I13 439 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 MS4A4AQ96JQ5 239 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 WRNIP1Q96S55 665 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 MCOLN1Q9GZU1 580 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
CHRNA3-208ENST00000561128 FOCADQ5VW36 1801 aa15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 DDTLA6NHG4 134 aaPredicted RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 ZBTB48P10074 688 aaPredicted RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 OTUD5Q96G74 571 aa15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 ANTXR1Q9H6X2 564 aa15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.57■□□□□ 0.08
CHRNA3-208ENST00000561128 GPR75-ASB3A0A0A6YYF3 556 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 FAM196BA6NMK8 535 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 UQCRFS1P1P0C7P4 283 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 PICALMQ13492 652 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 AACSQ86V21 672 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 RHPN1Q8TCX5 695 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 ZNF296Q8WUU4 475 aaPredicted RBP15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 IDI2Q9BXS1 227 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 DOCK1Q14185 1865 aa15.56■□□□□ 0.08
CHRNA3-208ENST00000561128 AK9Q5TCS8 1911 aa15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 PHIPQ8WWQ0 1821 aa15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 DDX60LQ5H9U9 1706 aaKnown RBP15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 MANSC4A6NHS7 340 aaPredicted RBP15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 SPDYE5A6NIY4 337 aa15.55■□□□□ 0.08
CHRNA3-208ENST00000561128 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms