RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GRK4P32298 578 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 MTFR1Q15390 333 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 CHRDL2Q6WN34 429 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 UBE2Q1Q7Z7E8 422 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 VGLL2Q8N8G2 317 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 DPF3Q92784 378 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 TRIM47Q96LD4 638 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 IQSEC3Q9UPP2 1182 aaPredicted RBP23.36■■□□□ 1.33
TPM1-226ENST00000560959 CAPN2P17655 700 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 CTGFP29279 349 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 METTL24Q5JXM2 366 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 RAET1EQ8TD07 263 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 FAM151AQ8WW52 585 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 HTATIP2Q9BUP3 242 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 CPA4Q9UI42 421 aa23.35■■□□□ 1.33
TPM1-226ENST00000560959 ADGRA2Q96PE1 1338 aa23.34■■□□□ 1.33
TPM1-226ENST00000560959 TRIOBPQ9H2D6 2365 aa23.34■■□□□ 1.33
TPM1-226ENST00000560959 PDHXO00330 501 aa23.34■■□□□ 1.33
TPM1-226ENST00000560959 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
TPM1-226ENST00000560959 OSBPP22059 807 aa23.34■■□□□ 1.33
TPM1-226ENST00000560959 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
TPM1-226ENST00000560959 RBM27Q9P2N5 1060 aaKnown RBP23.34■■□□□ 1.33
TPM1-226ENST00000560959 FMNL1O95466 1100 aaPredicted RBP23.33■■□□□ 1.33
TPM1-226ENST00000560959 BCAMP50895 628 aa23.33■■□□□ 1.33
TPM1-226ENST00000560959 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
TPM1-226ENST00000560959 RANBP2P49792 3224 aaKnown RBP23.33■■□□□ 1.33
TPM1-226ENST00000560959 INPP5BP32019 993 aa23.32■■□□□ 1.32
TPM1-226ENST00000560959 UBXN2AP68543 259 aa23.32■■□□□ 1.32
TPM1-226ENST00000560959 NOL9Q5SY16 702 aaKnown RBP23.32■■□□□ 1.32
TPM1-226ENST00000560959 MIGA2Q7L4E1 593 aa23.32■■□□□ 1.32
TPM1-226ENST00000560959 PRO3102Q9H379 93 aa23.32■■□□□ 1.32
TPM1-226ENST00000560959 BICC1Q9H694 974 aaKnown RBP23.32■■□□□ 1.32
TPM1-226ENST00000560959 NR2E3Q9Y5X4 410 aa23.32■■□□□ 1.32
TPM1-226ENST00000560959 CXCL11O14625 94 aa23.31■■□□□ 1.32
TPM1-226ENST00000560959 CCL5P13501 91 aa23.31■■□□□ 1.32
TPM1-226ENST00000560959 MOGSQ13724 837 aa23.31■■□□□ 1.32
TPM1-226ENST00000560959 WDR66Q8TBY9 1149 aa23.31■■□□□ 1.32
TPM1-226ENST00000560959 MYPNQ86TC9 1320 aa23.31■■□□□ 1.32
TPM1-226ENST00000560959 IFIT1P09914 478 aaKnown RBP23.3■■□□□ 1.32
TPM1-226ENST00000560959 FGFR2P21802 821 aa23.3■■□□□ 1.32
TPM1-226ENST00000560959 PARK7Q99497 189 aaKnown RBP23.3■■□□□ 1.32
TPM1-226ENST00000560959 RNF208Q9H0X6 261 aa23.3■■□□□ 1.32
TPM1-226ENST00000560959 BCRP11274 1271 aa23.29■■□□□ 1.32
TPM1-226ENST00000560959 PUM3Q15397 648 aaKnown RBP23.29■■□□□ 1.32
TPM1-226ENST00000560959 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
TPM1-226ENST00000560959 SLAIN1Q8ND83 568 aa23.29■■□□□ 1.32
TPM1-226ENST00000560959 FCGRTP55899 365 aa23.28■■□□□ 1.32
TPM1-226ENST00000560959 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
TPM1-226ENST00000560959 ZSWIM8A7E2V4 1837 aa23.28■■□□□ 1.32
TPM1-226ENST00000560959 A0A1W2PPC1 479 aa23.27■■□□□ 1.32
TPM1-226ENST00000560959 BIN2Q9UBW5 565 aaPredicted RBP23.27■■□□□ 1.32
TPM1-226ENST00000560959 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
TPM1-226ENST00000560959 PRKCZQ05513 592 aa23.26■■□□□ 1.31
TPM1-226ENST00000560959 GPAT2Q6NUI2 795 aa23.26■■□□□ 1.31
TPM1-226ENST00000560959 CDC42EP5Q6NZY7 148 aa23.26■■□□□ 1.31
TPM1-226ENST00000560959 FASTKD5Q7L8L6 764 aaKnown RBP23.26■■□□□ 1.31
TPM1-226ENST00000560959 U2AF1L4Q8WU68 220 aaKnown RBP23.26■■□□□ 1.31
TPM1-226ENST00000560959 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
TPM1-226ENST00000560959 SGPL1O95470 568 aa23.25■■□□□ 1.31
TPM1-226ENST00000560959 LPIN2Q92539 896 aa23.25■■□□□ 1.31
TPM1-226ENST00000560959 SLC45A1Q9Y2W3 748 aa23.25■■□□□ 1.31
TPM1-226ENST00000560959 DAGLAQ9Y4D2 1042 aa23.25■■□□□ 1.31
TPM1-226ENST00000560959 ECM2O94769 699 aaPredicted RBP23.24■■□□□ 1.31
TPM1-226ENST00000560959 PXYLP1Q8TE99 480 aa23.24■■□□□ 1.31
TPM1-226ENST00000560959 FARP2O94887 1054 aaPredicted RBP23.23■■□□□ 1.31
TPM1-226ENST00000560959 SLC5A1P13866 664 aa23.23■■□□□ 1.31
TPM1-226ENST00000560959 TCP10Q12799 353 aa23.23■■□□□ 1.31
TPM1-226ENST00000560959 FAM198AQ9UFP1 575 aa23.23■■□□□ 1.31
TPM1-226ENST00000560959 A0A0G2JLL6 359 aaPredicted RBP23.22■■□□□ 1.31
TPM1-226ENST00000560959 ZBTB22O15209 634 aa23.22■■□□□ 1.31
TPM1-226ENST00000560959 CYP2C8P10632 490 aa23.22■■□□□ 1.31
TPM1-226ENST00000560959 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
TPM1-226ENST00000560959 NFIAQ12857 509 aa23.22■■□□□ 1.31
TPM1-226ENST00000560959 IRF5Q13568 498 aa23.22■■□□□ 1.31
TPM1-226ENST00000560959 PRRT2Q7Z6L0 340 aaPredicted RBP23.22■■□□□ 1.31
TPM1-226ENST00000560959 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
TPM1-226ENST00000560959 PHF20L1A8MW92 1017 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 EYA2O00167 538 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 ADCY3O60266 1144 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 MAP3K10Q02779 954 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 UNC93B1Q9H1C4 597 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 USP40Q9NVE5 1235 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 GABRQQ9UN88 632 aa23.21■■□□□ 1.31
TPM1-226ENST00000560959 PTPRCP08575 1304 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 SALL1Q9NSC2 1324 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 SCYL3Q8IZE3 742 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 IDI2Q9BXS1 227 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 USP44Q9H0E7 712 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 AFG3L2Q9Y4W6 797 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 ZHX2Q9Y6X8 837 aa23.2■■□□□ 1.3
TPM1-226ENST00000560959 ENTPD3O75355 529 aa23.19■■□□□ 1.3
TPM1-226ENST00000560959 LDHBP07195 334 aaKnown RBP23.19■■□□□ 1.3
TPM1-226ENST00000560959 PTPRAP18433 802 aa23.19■■□□□ 1.3
TPM1-226ENST00000560959 FLT3LGP49771 235 aa23.19■■□□□ 1.3
TPM1-226ENST00000560959 DIXDC1Q155Q3 683 aa23.19■■□□□ 1.3
TPM1-226ENST00000560959 PICK1Q9NRD5 415 aa23.19■■□□□ 1.3
TPM1-226ENST00000560959 GNL3LQ9NVN8 582 aaKnown RBP23.19■■□□□ 1.3
TPM1-226ENST00000560959 FBXO3Q9UK99 471 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms