RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.19
GABPB1-210ENST00000560825 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.19
GABPB1-210ENST00000560825 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.19
GABPB1-210ENST00000560825 FBXO3Q9UK99 471 aa13.9□□□□□ -0.19
GABPB1-210ENST00000560825 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 GNAI2P04899 355 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 TCP10Q12799 353 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 MIGA2Q7L4E1 593 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 SNCAIPQ9Y6H5 919 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 PTPRFP10586 1907 aa13.89□□□□□ -0.19
GABPB1-210ENST00000560825 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 GPR25O00155 361 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 IREB2P48200 963 aaKnown RBP13.88□□□□□ -0.19
GABPB1-210ENST00000560825 POLA2Q14181 598 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 ANKRD13AQ8IZ07 590 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 MRIQ9BWK5 157 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 FOCADQ5VW36 1801 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
GABPB1-210ENST00000560825 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-210ENST00000560825 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
GABPB1-210ENST00000560825 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
GABPB1-210ENST00000560825 ZBTB48P10074 688 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-210ENST00000560825 INPP5BP32019 993 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 CHRDL2Q6WN34 429 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
GABPB1-210ENST00000560825 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 DOCK1Q14185 1865 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 MCAMP43121 646 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 CRHR2Q13324 411 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-210ENST00000560825 BRI3BPQ8WY22 251 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
GABPB1-210ENST00000560825 TLR7Q9NYK1 1049 aaKnown RBP13.86□□□□□ -0.19
GABPB1-210ENST00000560825 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-210ENST00000560825 DENND2AQ9ULE3 1009 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
GABPB1-210ENST00000560825 SOX10P56693 466 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 SREBF2Q12772 1141 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 FAM83AQ86UY5 434 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 SSH3Q8TE77 659 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 CFHR5Q9BXR6 569 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 USP40Q9NVE5 1235 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
GABPB1-210ENST00000560825 GAKO14976 1311 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 MAST3O60307 1309 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-210ENST00000560825 MANSC4A6NHS7 340 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-210ENST00000560825 TNNI2P48788 182 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 MECOMQ03112 1051 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
GABPB1-210ENST00000560825 FAM43AQ8N2R8 423 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
GABPB1-210ENST00000560825 RPAP1Q9BWH6 1393 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-210ENST00000560825 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-210ENST00000560825 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-210ENST00000560825 FKBP1CQ5VVH2 108 aa13.83□□□□□ -0.2
GABPB1-210ENST00000560825 FAM151AQ8WW52 585 aa13.83□□□□□ -0.2
GABPB1-210ENST00000560825 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
GABPB1-210ENST00000560825 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
GABPB1-210ENST00000560825 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
GABPB1-210ENST00000560825 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 IRF6O14896 467 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 SEMA3EO15041 775 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-210ENST00000560825 RGS3P49796 1198 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 RHBDL3P58872 404 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 SPATA5Q8NB90 893 aa13.82□□□□□ -0.2
GABPB1-210ENST00000560825 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 UNCXA6NJT0 531 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 PHF20L1A8MW92 1017 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 ZBTB22O15209 634 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 FKTNO75072 461 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 BTDP43251 543 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 RGS19P49795 217 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 CCL15Q16663 113 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 TNNI3KQ59H18 835 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 CD99L2Q8TCZ2 262 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms