RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ZSCAN23Q3MJ62 389 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 C16orf86Q6ZW13 317 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 TMEM260Q9NX78 707 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 FAM50BQ9Y247 325 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 IFT172Q9UG01 1749 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 RICTORQ6R327 1708 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 WASLO00401 505 aaPredicted RBP7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 FBXO24O75426 580 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 SAMD3Q8N6K7 520 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 UBP1Q9NZI7 540 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 CGNL1Q0VF96 1302 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 EIF1AYO14602 144 aaKnown RBP7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 NPR3P17342 541 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 FAM160A1Q05DH4 1040 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 COX20Q5RI15 118 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 LHFPL2Q6ZUX7 228 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 PIBF1Q8WXW3 757 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 CASS4Q9NQ75 786 aa7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 COL17A1Q9UMD9 1497 aaPredicted RBP7.95□□□□□ -1.14
TSPAN3-209ENST00000560715 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 GUCY2FP51841 1108 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 TERF2Q15554 542 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 C16orf46Q6P387 395 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 CPLX3Q8WVH0 158 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 ASPSCR1Q9BZE9 553 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 FAM177BA6PVY3 158 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 hCG_1984214I3L0E3 225 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 PGRP06401 933 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 EPB42P16452 691 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 EIF4BP23588 611 aaKnown RBP7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 NOLC1Q14978 699 aaKnown RBP eCLIP7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 ZRSR2Q15696 482 aaKnown RBP7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 NBPF6Q5VWK0 638 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 ALG1LQ6GMV1 187 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 NBPF4Q96M43 638 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 MUC3BQ9H195 1237 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 TMX1Q9H3N1 280 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 MYOM2P54296 1465 aa7.94□□□□□ -1.14
TSPAN3-209ENST00000560715 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 CD44P16070 742 aaKnown RBP7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 MTMR1Q13613 665 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 CHMP4CQ96CF2 233 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 CTIFO43310 598 aaKnown RBP7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 VARSP26640 1264 aaKnown RBP7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 MAP3K11Q16584 847 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 CCDC93Q567U6 631 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 THNSL2Q86YJ6 484 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 ZBTB9Q96C00 473 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 TESK2Q96S53 571 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 FEZ2Q9UHY8 353 aaPredicted RBP7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 PTCH2Q9Y6C5 1203 aa7.93□□□□□ -1.14
TSPAN3-209ENST00000560715 VSTM5A8MXK1 200 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 RNASEH2AO75792 299 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 BAG4O95429 457 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 IFIT2P09913 472 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 GPSM2P81274 684 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 MAP7D1Q3KQU3 841 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 ARSHQ5FYA8 562 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CAVIN1Q6NZI2 390 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CHPFQ8IZ52 775 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CACTIN-AS1Q8N1I8 211 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 ANKRD42Q8N9B4 389 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 PPM1EQ8WY54 764 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CDC5LQ99459 802 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 EIF2AK1Q9BQI3 630 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 SPTLC3Q9NUV7 552 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 MAPK8IP1Q9UQF2 711 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 ZC3H13Q5T200 1668 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 SETDB1Q15047 1291 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 FAM83BQ5T0W9 1011 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 KIAA0825Q8IV33 1275 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 LUZP4Q9P127 313 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 ZNF521Q96K83 1311 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 NPC1L1Q9UHC9 1359 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 MROH2AA6NES4 1674 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 B2RBV5 119 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 PDE8AO60658 829 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 TMF1P82094 1093 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 MTERF2Q49AM1 385 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 SCAF11Q99590 1463 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 RBM42Q9BTD8 480 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 DIAPH3Q9NSV4 1193 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 CTNNA3Q9UI47 895 aa7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 MORC2Q9Y6X9 1032 aaPredicted RBP7.92□□□□□ -1.14
TSPAN3-209ENST00000560715 ABCC3O15438 1527 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 NUDT7P0C024 238 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 USP17L7P0C7H9 530 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 SCTRP47872 440 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 ST13P50502 369 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms