RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
TPM1-225ENST00000560679 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
TPM1-225ENST00000560679 BCRP11274 1271 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 HDLBPQ00341 1268 aaKnown RBP12.59□□□□□ -0.39
TPM1-225ENST00000560679 PPATQ06203 517 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
TPM1-225ENST00000560679 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 GABRQQ9UN88 632 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 NR2E3Q9Y5X4 410 aa12.59□□□□□ -0.39
TPM1-225ENST00000560679 SPTBN5Q9NRC6 3674 aaKnown RBP12.58□□□□□ -0.4
TPM1-225ENST00000560679 VCANP13611 3396 aa12.58□□□□□ -0.4
TPM1-225ENST00000560679 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
TPM1-225ENST00000560679 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
TPM1-225ENST00000560679 TEKT1Q969V4 418 aa12.58□□□□□ -0.4
TPM1-225ENST00000560679 PRKRIP1Q9H875 184 aaPredicted RBP12.58□□□□□ -0.4
TPM1-225ENST00000560679 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
TPM1-225ENST00000560679 PTPRFP10586 1907 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 GRM8O00222 908 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 HOXD10P28358 340 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 UBXN2AP68543 259 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 GPAT2Q6NUI2 795 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 MIGA2Q7L4E1 593 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 ZNF112Q9UJU3 913 aa12.57□□□□□ -0.4
TPM1-225ENST00000560679 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 SGPL1O95470 568 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 INHAP05111 366 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 CYP2C8P10632 490 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 ELNP15502 786 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
TPM1-225ENST00000560679 FCGRTP55899 365 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 VGLL2Q8N8G2 317 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 PARK7Q99497 189 aaKnown RBP12.56□□□□□ -0.4
TPM1-225ENST00000560679 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
TPM1-225ENST00000560679 MYH13Q9UKX3 1938 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
TPM1-225ENST00000560679 EVI5O60447 810 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 VAMP4O75379 141 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
TPM1-225ENST00000560679 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 PAK6Q9NQU5 681 aaPredicted RBP12.55□□□□□ -0.4
TPM1-225ENST00000560679 IL16Q14005 1332 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 PHIPQ8WWQ0 1821 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 EYSQ5T1H1 3165 aa12.55□□□□□ -0.4
TPM1-225ENST00000560679 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
TPM1-225ENST00000560679 ADCY3O60266 1144 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 FLT3LGP49771 235 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 NFIAQ12857 509 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 Q7L0L9 218 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 DIS3LQ8TF46 1054 aaKnown RBP12.54□□□□□ -0.4
TPM1-225ENST00000560679 FAM151AQ8WW52 585 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 GDF15Q99988 308 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 MRIQ9BWK5 157 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
TPM1-225ENST00000560679 BCAMP50895 628 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 HHIPL2Q6UWX4 724 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 MAST3O60307 1309 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
TPM1-225ENST00000560679 DOCK1Q14185 1865 aa12.53□□□□□ -0.4
TPM1-225ENST00000560679 A0A0G2JLL6 359 aaPredicted RBP12.52□□□□□ -0.41
TPM1-225ENST00000560679 TCP10Q12799 353 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 IRF5Q13568 498 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 PRRT2Q7Z6L0 340 aaPredicted RBP12.52□□□□□ -0.41
TPM1-225ENST00000560679 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.41
TPM1-225ENST00000560679 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 AK9Q5TCS8 1911 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.41
TPM1-225ENST00000560679 CXCL11O14625 94 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
TPM1-225ENST00000560679 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
TPM1-225ENST00000560679 BMP8BP34820 402 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
TPM1-225ENST00000560679 METTL24Q5JXM2 366 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 C7orf61Q8IZ16 206 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 DEFB123Q8N688 67 aa12.51□□□□□ -0.41
TPM1-225ENST00000560679 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms