RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 KAZALD1Q96I82 304 aa12.06□□□□□ -0.48
HERC1-209ENST00000560519 ATAD5Q96QE3 1844 aa12.06□□□□□ -0.48
HERC1-209ENST00000560519 SLC5A1P13866 664 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 CACNB3P54284 484 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 CAP1Q01518 475 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 ANKRD23Q86SG2 305 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 SH3TC2Q8TF17 1288 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
HERC1-209ENST00000560519 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
HERC1-209ENST00000560519 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
HERC1-209ENST00000560519 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.48
HERC1-209ENST00000560519 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
HERC1-209ENST00000560519 FAM151AQ8WW52 585 aa12.04□□□□□ -0.48
HERC1-209ENST00000560519 LPIN2Q92539 896 aa12.04□□□□□ -0.48
HERC1-209ENST00000560519 PARK7Q99497 189 aaKnown RBP12.04□□□□□ -0.48
HERC1-209ENST00000560519 MYPNQ86TC9 1320 aa12.04□□□□□ -0.48
HERC1-209ENST00000560519 PDHXO00330 501 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 GRIK5Q16478 980 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 NOL9Q5SY16 702 aaKnown RBP12.03□□□□□ -0.48
HERC1-209ENST00000560519 APOBEC3HQ6NTF7 200 aaKnown RBP12.03□□□□□ -0.48
HERC1-209ENST00000560519 C17orf99Q6UX52 265 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
HERC1-209ENST00000560519 RAET1EQ8TD07 263 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 HTATIP2Q9BUP3 242 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 ARHGAP39Q9C0H5 1083 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 SPINK5Q9NQ38 1064 aaPredicted RBP12.03□□□□□ -0.48
HERC1-209ENST00000560519 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
HERC1-209ENST00000560519 SEMA3EO15041 775 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 MYCP01106 439 aaPredicted RBP12.02□□□□□ -0.49
HERC1-209ENST00000560519 CAPN2P17655 700 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 FGFR2P21802 821 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 GRK4P32298 578 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 BCAMP50895 628 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 FCGRTP55899 365 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 UBXN2AP68543 259 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
HERC1-209ENST00000560519 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.49
HERC1-209ENST00000560519 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 KCNH4Q9UQ05 1017 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
HERC1-209ENST00000560519 ADGRA2Q96PE1 1338 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 SALL1Q9NSC2 1324 aa12.02□□□□□ -0.49
HERC1-209ENST00000560519 EYA2O00167 538 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
HERC1-209ENST00000560519 LDHBP07195 334 aaKnown RBP12.01□□□□□ -0.49
HERC1-209ENST00000560519 OSBPP22059 807 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 PSMC4P43686 418 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 CPA4Q9UI42 421 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 ZNF112Q9UJU3 913 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 DAGLAQ9Y4D2 1042 aa12.01□□□□□ -0.49
HERC1-209ENST00000560519 INPP5BP32019 993 aa12□□□□□ -0.49
HERC1-209ENST00000560519 GJA8P48165 433 aa12□□□□□ -0.49
HERC1-209ENST00000560519 TCP10Q12799 353 aa12□□□□□ -0.49
HERC1-209ENST00000560519 MIGA2Q7L4E1 593 aa12□□□□□ -0.49
HERC1-209ENST00000560519 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
HERC1-209ENST00000560519 SLF2Q8IX21 1173 aa12□□□□□ -0.49
HERC1-209ENST00000560519 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
HERC1-209ENST00000560519 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
HERC1-209ENST00000560519 E9PSI1 815 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 H0YGN5 161 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 CXCL11O14625 94 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 ZBTB22O15209 634 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 CIAO1O76071 339 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 GJB1P08034 283 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 PRDX5P30044 214 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 MRPL50Q8N5N7 158 aaKnown RBP11.99□□□□□ -0.49
HERC1-209ENST00000560519 SHISA4Q96DD7 197 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 RFX7Q2KHR2 1363 aa11.99□□□□□ -0.49
HERC1-209ENST00000560519 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 COL2A1P02458 1487 aaPredicted RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 ATRNL1Q5VV63 1379 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 PDS5AQ29RF7 1337 aaKnown RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 ENTPD3O75355 529 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 CCL5P13501 91 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 ALDH1L2Q3SY69 923 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 SMCR8Q8TEV9 937 aaPredicted RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 DPF3Q92784 378 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 BIN2Q9UBW5 565 aaPredicted RBP11.98□□□□□ -0.49
HERC1-209ENST00000560519 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
HERC1-209ENST00000560519 KIAA0100Q14667 2235 aaKnown RBP11.97□□□□□ -0.49
HERC1-209ENST00000560519 A0A0G2JLL6 359 aaPredicted RBP11.97□□□□□ -0.49
HERC1-209ENST00000560519 BCRP11274 1271 aa11.97□□□□□ -0.49
HERC1-209ENST00000560519 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms