RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 TRDNQ13061 729 aa12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
SNRPA1-211ENST00000560433 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 STX6O43752 255 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 KDM4AO75164 1064 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 PRDM1O75626 825 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 MCM5P33992 734 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 MPNDQ8N594 471 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 TRAK2O60296 914 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 ALDH1B1P30837 517 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 GTF2IP78347 998 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 DPP8Q6V1X1 898 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 NACAP1Q9BZK3 213 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
SNRPA1-211ENST00000560433 H0YIN7 160 aa12.83□□□□□ -0.35
SNRPA1-211ENST00000560433 PDIA3P30101 505 aaKnown RBP12.83□□□□□ -0.35
SNRPA1-211ENST00000560433 FERMT3Q86UX7 667 aa12.83□□□□□ -0.35
SNRPA1-211ENST00000560433 ZSWIM5Q9P217 1185 aa12.83□□□□□ -0.35
SNRPA1-211ENST00000560433 CHD4Q14839 1912 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 SOCS7O14512 581 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 PRPF40AO75400 957 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 GNAT2P19087 354 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 PPARAQ07869 468 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 MFSD14BQ5SR56 506 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 WDR66Q8TBY9 1149 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
SNRPA1-211ENST00000560433 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 USP17L21D6R901 530 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 CYP2D6P10635 497 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 ALX1Q15699 326 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 FAM173BQ6P4H8 233 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 IL1R1P14778 569 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 SH3RF3Q8TEJ3 882 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 TCHHQ07283 1943 aa12.82□□□□□ -0.36
SNRPA1-211ENST00000560433 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 PFKFB2O60825 505 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 NCLP19338 710 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
SNRPA1-211ENST00000560433 G3V3G9 751 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 DEKP35659 375 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 C15orf52Q6ZUT6 534 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 NSUN7Q8NE18 718 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 MICU3Q86XE3 530 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
SNRPA1-211ENST00000560433 PTPDC1A2A3K4 754 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 C21orf2O43822 256 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 F13A1P00488 732 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 GSE1Q14687 1217 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 TMEM67Q5HYA8 995 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 IGDCC4Q8TDY8 1250 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 STAG1Q8WVM7 1258 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms