RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 SLC4A10Q6U841 1118 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 EYA3Q99504 573 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 DBNDD1Q9H9R9 158 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 GGA1Q9UJY5 639 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 MYH3P11055 1940 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 PTPRCP08575 1304 aa8.24□□□□□ -1.09
IRF9-208ENST00000560311 MED23Q9ULK4 1368 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 GRM8O00222 908 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 ALDH1L1O75891 902 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 RAD17O75943 681 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 ITGA6P23229 1130 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
IRF9-208ENST00000560311 GMPSP49915 693 aaPredicted RBP8.23□□□□□ -1.09
IRF9-208ENST00000560311 HTRA3P83110 453 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 CXCL9Q07325 125 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 HIC1Q14526 733 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 WASHC4Q2M389 1173 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 CIAPIN1Q6FI81 312 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
IRF9-208ENST00000560311 NPAS3Q8IXF0 933 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 TRMT2AQ8IZ69 625 aaKnown RBP8.23□□□□□ -1.09
IRF9-208ENST00000560311 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
IRF9-208ENST00000560311 A0A1B0GUL6 1792 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 ZNF609O15014 1411 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 EPS15P42566 896 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 FOXO4P98177 505 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 ALDH1L2Q3SY69 923 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
IRF9-208ENST00000560311 GPRC5DQ9NZD1 345 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 PASKQ96RG2 1323 aa8.22□□□□□ -1.09
IRF9-208ENST00000560311 CACNA1FO60840 1977 aa8.21□□□□□ -1.09
IRF9-208ENST00000560311 ANKRD18BA2A2Z9 1011 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 PSMD14O00487 310 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 DXOO77932 396 aaKnown RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 CSF1RP07333 972 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 CT47B1P0C2W7 299 aaPredicted RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 ATP2B4P23634 1241 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 TNIP1Q15025 636 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 EPHA10Q5JZY3 1008 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 MAP1SQ66K74 1059 aaPredicted RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 ADARB2Q9NS39 739 aaKnown RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 C9orf78Q9NZ63 289 aaPredicted RBP8.21□□□□□ -1.1
IRF9-208ENST00000560311 MINPP1Q9UNW1 487 aa8.21□□□□□ -1.1
IRF9-208ENST00000560311 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 SEMA3EO15041 775 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 KLRK1P26718 216 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 CCT4P50991 539 aaKnown RBP8.2□□□□□ -1.1
IRF9-208ENST00000560311 WNT7BP56706 349 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 HNRNPUQ00839 825 aaKnown RBP eCLIP8.2□□□□□ -1.1
IRF9-208ENST00000560311 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
IRF9-208ENST00000560311 Q3C1V9 767 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 LMBR1LQ6UX01 489 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
IRF9-208ENST00000560311 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
IRF9-208ENST00000560311 UTYO14607 1347 aa8.2□□□□□ -1.1
IRF9-208ENST00000560311 ZNF646O15015 1829 aaPredicted RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 RPS12P25398 132 aaKnown RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 KCNJ4P48050 445 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 CHRNDQ07001 517 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 KAZALD1Q96I82 304 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 PHOX2BQ99453 314 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 USB1Q9BQ65 265 aaKnown RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
IRF9-208ENST00000560311 KCNQ5Q9NR82 932 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 ZNF804BA4D1E1 1349 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 KIF16BQ96L93 1317 aa8.19□□□□□ -1.1
IRF9-208ENST00000560311 THSD7BQ9C0I4 1608 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 PSME4Q14997 1843 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 RARSP54136 660 aaKnown RBP8.18□□□□□ -1.1
IRF9-208ENST00000560311 CCDC57Q2TAC2 916 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
IRF9-208ENST00000560311 CNTROBQ8N137 903 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 DNAJC5GQ8N7S2 189 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 ANKRD44Q8N8A2 993 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
IRF9-208ENST00000560311 NOB1Q9ULX3 412 aaKnown RBP8.18□□□□□ -1.1
IRF9-208ENST00000560311 LEMD3Q9Y2U8 911 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 SCN9AQ15858 1988 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 CNTNAP1P78357 1384 aa8.18□□□□□ -1.1
IRF9-208ENST00000560311 H7C1D1 291 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 EGFRP00533 1210 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
IRF9-208ENST00000560311 KIF4BQ2VIQ3 1234 aa8.17□□□□□ -1.1
IRF9-208ENST00000560311 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms