RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 UBXN2AP68543 259 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 MOGSQ13724 837 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
RABGGTA-213ENST00000560127 SGPL1O95470 568 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 TEKT1Q969V4 418 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
RABGGTA-213ENST00000560127 VCANP13611 3396 aa16.27■□□□□ 0.19
RABGGTA-213ENST00000560127 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 EVI5O60447 810 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 BCRP11274 1271 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 BEND3Q5T5X7 828 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 DCAF15Q66K64 600 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 APOBEC3HQ6NTF7 200 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 HOOK2Q96ED9 719 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-213ENST00000560127 FCGRTP55899 365 aa16.25■□□□□ 0.19
RABGGTA-213ENST00000560127 TMOD2Q9NZR1 351 aa16.25■□□□□ 0.19
RABGGTA-213ENST00000560127 F6X3S4 739 aa16.24■□□□□ 0.19
RABGGTA-213ENST00000560127 TBC1D22AQ8WUA7 517 aa16.24■□□□□ 0.19
RABGGTA-213ENST00000560127 MRIQ9BWK5 157 aa16.24■□□□□ 0.19
RABGGTA-213ENST00000560127 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
RABGGTA-213ENST00000560127 PHIPQ8WWQ0 1821 aa16.24■□□□□ 0.19
RABGGTA-213ENST00000560127 DNAH12Q6ZR08 3092 aa16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 GRM8O00222 908 aa16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 ADCY3O60266 1144 aa16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 CYP2C8P10632 490 aa16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 GPAT2Q6NUI2 795 aa16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 PARK7Q99497 189 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-213ENST00000560127 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 INHAP05111 366 aa16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 ELNP15502 786 aa16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 DEFB118Q96PH6 123 aa16.22■□□□□ 0.19
RABGGTA-213ENST00000560127 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 EYSQ5T1H1 3165 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 BMP8BP34820 402 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 FLT3LGP49771 235 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 GPR153Q6NV75 609 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 PAWRQ96IZ0 340 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 GDF15Q99988 308 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-213ENST00000560127 MROH5Q6ZUA9 1318 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 VAMP4O75379 141 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 CAPN2P17655 700 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 HHIPL2Q6UWX4 724 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 Q7L0L9 218 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 TTC28Q96AY4 2481 aa16.2■□□□□ 0.18
RABGGTA-213ENST00000560127 MAST3O60307 1309 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 DDX60LQ5H9U9 1706 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 MYH2Q9UKX2 1941 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 CXCL11O14625 94 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 IRF5Q13568 498 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 DIS3LQ8TF46 1054 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 STXBP5LQ9Y2K9 1186 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 SUGT1Q9Y2Z0 365 aa16.19■□□□□ 0.18
RABGGTA-213ENST00000560127 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 BCAMP50895 628 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 TCP10Q12799 353 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 IL16Q14005 1332 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
RABGGTA-213ENST00000560127 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 NFIAQ12857 509 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 LRRC24Q50LG9 513 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 CDC42EP5Q6NZY7 148 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 NECAB2Q7Z6G3 386 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 C7orf61Q8IZ16 206 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 MTMR10Q9NXD2 777 aa16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-213ENST00000560127 A0A0G2JLL6 359 aaPredicted RBP16.16■□□□□ 0.18
RABGGTA-213ENST00000560127 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms