RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 RAI14Q9P0K7 980 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 HMG20BQ9P0W2 317 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
SNX1-207ENST00000559401 PDS5AQ29RF7 1337 aaKnown RBP10.06□□□□□ -0.8
SNX1-207ENST00000559401 DOCK2Q92608 1830 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 TRPA1O75762 1119 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
SNX1-207ENST00000559401 MCAMP43121 646 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 TCP10Q12799 353 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 HSP90AB4PQ58FF6 505 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 CDC42EP5Q6NZY7 148 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 TBC1D9Q6ZT07 1266 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 TEPSINQ96N21 525 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 CCDC8Q9H0W5 538 aaPredicted RBP10.05□□□□□ -0.8
SNX1-207ENST00000559401 LRP2BPQ9P2M1 347 aa10.05□□□□□ -0.8
SNX1-207ENST00000559401 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 CAPN15O75808 1086 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 BTDP43251 543 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 GSTO1P78417 241 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 MECOMQ03112 1051 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 MAP3K11Q16584 847 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 LDLRAD1Q5T700 205 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 FKBP1CQ5VVH2 108 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 AACSQ86V21 672 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 NOL10Q9BSC4 688 aaKnown RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 ELP3Q9H9T3 547 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 ZBTB40Q9NUA8 1239 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 TLR7Q9NYK1 1049 aaKnown RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 CSADQ9Y600 493 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 CASP8AP2Q9UKL3 1982 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
SNX1-207ENST00000559401 MROH7-TTC4A0A0A0MT08 1334 aa10.04□□□□□ -0.8
SNX1-207ENST00000559401 RPAP1Q9BWH6 1393 aaPredicted RBP10.03□□□□□ -0.8
SNX1-207ENST00000559401 ZBTB22O15209 634 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 LDHCP07864 332 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 SREBF2Q12772 1141 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 NFIAQ12857 509 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 PICALMQ13492 652 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 IFFO2Q5TF58 517 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 DCAF15Q66K64 600 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
SNX1-207ENST00000559401 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 FAM151AQ8WW52 585 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 EAF2Q96CJ1 260 aaPredicted RBP10.03□□□□□ -0.8
SNX1-207ENST00000559401 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 WRNIP1Q96S55 665 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 RNF186Q9NXI6 227 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
SNX1-207ENST00000559401 GAKO14976 1311 aa10.03□□□□□ -0.8
SNX1-207ENST00000559401 MANSC4A6NHS7 340 aaPredicted RBP10.02□□□□□ -0.81
SNX1-207ENST00000559401 ZBTB48P10074 688 aaPredicted RBP10.02□□□□□ -0.81
SNX1-207ENST00000559401 ZAP70P43403 619 aa10.02□□□□□ -0.81
SNX1-207ENST00000559401 RGS3P49796 1198 aa10.02□□□□□ -0.81
SNX1-207ENST00000559401 MIGA2Q7L4E1 593 aa10.02□□□□□ -0.81
SNX1-207ENST00000559401 CLASRPQ8N2M8 674 aaKnown RBP10.02□□□□□ -0.81
SNX1-207ENST00000559401 OPTNQ96CV9 577 aa10.02□□□□□ -0.81
SNX1-207ENST00000559401 KIF1BPQ96EK5 621 aa10.02□□□□□ -0.81
SNX1-207ENST00000559401 LAMB1P07942 1786 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
SNX1-207ENST00000559401 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 VGLL4Q14135 290 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
SNX1-207ENST00000559401 SIRT2Q8IXJ6 389 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNX1-207ENST00000559401 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
SNX1-207ENST00000559401 OTUD5Q96G74 571 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 ZNF341Q9BYN7 854 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
SNX1-207ENST00000559401 PCNTO95613 3336 aa10□□□□□ -0.81
SNX1-207ENST00000559401 GPR75-ASB3A0A0A6YYF3 556 aa10□□□□□ -0.81
SNX1-207ENST00000559401 RAB11FIP3O75154 756 aa10□□□□□ -0.81
SNX1-207ENST00000559401 ENTPD3O75355 529 aa10□□□□□ -0.81
SNX1-207ENST00000559401 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
SNX1-207ENST00000559401 TBC1D8O95759 1140 aa10□□□□□ -0.81
SNX1-207ENST00000559401 CYP2E1P05181 493 aaPredicted RBP10□□□□□ -0.81
SNX1-207ENST00000559401 RRP1P56182 461 aaKnown RBP10□□□□□ -0.81
SNX1-207ENST00000559401 PPP1R3FQ6ZSY5 799 aaPredicted RBP10□□□□□ -0.81
SNX1-207ENST00000559401 TEX11Q8IYF3 940 aa10□□□□□ -0.81
SNX1-207ENST00000559401 ZNF384Q8TF68 577 aa10□□□□□ -0.81
SNX1-207ENST00000559401 CNKSR2Q8WXI2 1034 aa10□□□□□ -0.81
SNX1-207ENST00000559401 ZKSCAN4Q969J2 545 aaPredicted RBP10□□□□□ -0.81
SNX1-207ENST00000559401 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
SNX1-207ENST00000559401 ZNF512BQ96KM6 892 aaPredicted RBP10□□□□□ -0.81
SNX1-207ENST00000559401 NDUFB9Q9Y6M9 179 aa10□□□□□ -0.81
SNX1-207ENST00000559401 WDHD1O75717 1129 aaPredicted RBP9.99□□□□□ -0.81
SNX1-207ENST00000559401 BAG3O95817 575 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 GJA5P36382 358 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 TM4SF4P48230 202 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms