RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 EXOC6BQ9Y2D4 811 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 PCDHAC2Q9Y5I4 1007 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 UBE2Q2LH0YL09 131 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 AOC2O75106 756 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 BAG3O95817 575 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 SLC10A3P09131 477 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 MCAMP43121 646 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 RRP1P56182 461 aaKnown RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 SREBF2Q12772 1141 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 AAMPQ13685 434 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 TTF1Q15361 905 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 DIXDC1Q155Q3 683 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 GRIK5Q16478 980 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 MAP3K11Q16584 847 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 NBPF12Q5TAG4 269 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 DCAF15Q66K64 600 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 TMED8Q6PL24 325 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 RHPN1Q8TCX5 695 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 EAF2Q96CJ1 260 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 FAM163AQ96GL9 167 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 DBNDD2Q9BQY9 259 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 LRRCC1Q9C099 1032 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 CCDC8Q9H0W5 538 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 USP40Q9NVE5 1235 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 HMG20BQ9P0W2 317 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 CSADQ9Y600 493 aa5.34□□□□□ -1.55
SNX1-205ENST00000559339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.34□□□□□ -1.55
SNX1-205ENST00000559339 FAM155AB1AL88 458 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 FOXN1O15353 648 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 MAP4K4O95819 1239 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 ALDH1A1P00352 501 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 ZBTB48P10074 688 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 PLCG2P16885 1265 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 BTDP43251 543 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 CACNB3P54284 484 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 INHBEP58166 350 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 KIF23Q02241 960 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 MECOMQ03112 1051 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 TCP10Q12799 353 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 MAP3K12Q12852 859 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 LDLRAD1Q5T700 205 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 OTUD7BQ6GQQ9 843 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 NAA16Q6N069 864 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 CDC42EP5Q6NZY7 148 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 PI16Q6UXB8 463 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 TBC1D9Q6ZT07 1266 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 MOB2Q70IA6 237 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 CERS3Q8IU89 383 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 ZSCAN29Q8IWY8 852 aaPredicted RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 SIRT2Q8IXJ6 389 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 FAM151AQ8WW52 585 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 GPATCH3Q96I76 525 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 IDI2Q9BXS1 227 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 IL1RAPL2Q9NP60 686 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 SNRKQ9NRH2 765 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 SAGE1Q9NXZ1 904 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 DBNLQ9UJU6 430 aaKnown RBP5.33□□□□□ -1.56
SNX1-205ENST00000559339 DAGLAQ9Y4D2 1042 aa5.33□□□□□ -1.56
SNX1-205ENST00000559339 PSME4Q14997 1843 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 MROH7-TTC4A0A0A0MT08 1334 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 GAKO14976 1311 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 GPR75-ASB3A0A0A6YYF3 556 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 MANSC4A6NHS7 340 aaPredicted RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 ENTPD3O75355 529 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 USP2O75604 605 aaPredicted RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 WDHD1O75717 1129 aaPredicted RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 IDH1O75874 414 aaKnown RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 CYP2E1P05181 493 aaPredicted RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 ZAP70P43403 619 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 LBX1P52954 281 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 MAP3K9P80192 1104 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 MKRN3Q13064 507 aaKnown RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 PICALMQ13492 652 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 SPRYD7Q5W111 196 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 NSUN4Q96CB9 384 aaKnown RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 TEPSINQ96N21 525 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 WRNIP1Q96S55 665 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 CSRNP1Q96S65 589 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 ZNF341Q9BYN7 854 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.32□□□□□ -1.56
SNX1-205ENST00000559339 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 TLR7Q9NYK1 1049 aaKnown RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.32□□□□□ -1.56
SNX1-205ENST00000559339 PAPPA2Q9BXP8 1791 aa5.32□□□□□ -1.56
SNX1-205ENST00000559339 RPAP1Q9BWH6 1393 aaPredicted RBP5.31□□□□□ -1.56
SNX1-205ENST00000559339 AOX1Q06278 1338 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 TRPA1O75762 1119 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 CYP7A1P22680 504 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 TM4SF4P48230 202 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 RGS3P49796 1198 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 GTF2A2P52657 109 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 NFIAQ12857 509 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 VGLL4Q14135 290 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 COL13A1Q5TAT6 717 aaPredicted RBP5.31□□□□□ -1.56
SNX1-205ENST00000559339 MIGA2Q7L4E1 593 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 ERO1BQ86YB8 467 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 TNS4Q8IZW8 715 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms