RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NBPF12Q5TAG4 269 aaPredicted RBP22.85■■□□□ 1.25
CASC4-209ENST00000559222 BOLA2Q9H3K6 86 aa22.85■■□□□ 1.25
CASC4-209ENST00000559222 THSD7BQ9C0I4 1608 aa22.85■■□□□ 1.25
CASC4-209ENST00000559222 MYH7P12883 1935 aa22.84■■□□□ 1.25
CASC4-209ENST00000559222 TEPSINQ96N21 525 aa22.84■■□□□ 1.25
CASC4-209ENST00000559222 DNAJC2Q99543 621 aaKnown RBP22.84■■□□□ 1.25
CASC4-209ENST00000559222 FOCADQ5VW36 1801 aa22.83■■□□□ 1.25
CASC4-209ENST00000559222 VEGFBP49765 207 aa22.83■■□□□ 1.25
CASC4-209ENST00000559222 AAMPQ13685 434 aa22.83■■□□□ 1.25
CASC4-209ENST00000559222 CYP4F22Q6NT55 531 aa22.83■■□□□ 1.25
CASC4-209ENST00000559222 FAM163AQ96GL9 167 aaPredicted RBP22.83■■□□□ 1.25
CASC4-209ENST00000559222 USP40Q9NVE5 1235 aa22.83■■□□□ 1.25
CASC4-209ENST00000559222 GOLIM4O00461 696 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 IDH1O75874 414 aaKnown RBP22.82■■□□□ 1.24
CASC4-209ENST00000559222 ATP5JP18859 108 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 HUNKP57058 714 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 DEFB115Q30KQ5 88 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 ZFPM1Q8IX07 1006 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.82■■□□□ 1.24
CASC4-209ENST00000559222 FAM198AQ9UFP1 575 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
CASC4-209ENST00000559222 GPR75-ASB3A0A0A6YYF3 556 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 UBE2Q2LH0YL09 131 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 RHBDL3P58872 404 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 GRM1Q13255 1194 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 ANKRD45Q5TZF3 282 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 C2orf69Q8N8R5 385 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
CASC4-209ENST00000559222 PPP2R3BQ9Y5P8 575 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 SALL3Q9BXA9 1300 aa22.81■■□□□ 1.24
CASC4-209ENST00000559222 CHGBP05060 677 aa22.8■■□□□ 1.24
CASC4-209ENST00000559222 TCP10Q12799 353 aa22.8■■□□□ 1.24
CASC4-209ENST00000559222 SLFNL1Q499Z3 407 aa22.8■■□□□ 1.24
CASC4-209ENST00000559222 NAA16Q6N069 864 aaPredicted RBP22.8■■□□□ 1.24
CASC4-209ENST00000559222 PAXIP1Q6ZW49 1069 aaPredicted RBP22.8■■□□□ 1.24
CASC4-209ENST00000559222 TMOD2Q9NZR1 351 aa22.8■■□□□ 1.24
CASC4-209ENST00000559222 WDHD1O75717 1129 aaPredicted RBP22.79■■□□□ 1.24
CASC4-209ENST00000559222 TNFAIP1Q13829 316 aa22.79■■□□□ 1.24
CASC4-209ENST00000559222 SMC5Q8IY18 1101 aa22.79■■□□□ 1.24
CASC4-209ENST00000559222 GCC1Q96CN9 775 aa22.79■■□□□ 1.24
CASC4-209ENST00000559222 HAUS7Q99871 368 aa22.79■■□□□ 1.24
CASC4-209ENST00000559222 ECHDC1Q9NTX5 307 aa22.79■■□□□ 1.24
CASC4-209ENST00000559222 SIPA1L1O43166 1804 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 AOC2O75106 756 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 RGS3P49796 1198 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 DYNLL1P63167 89 aaKnown RBP22.78■■□□□ 1.24
CASC4-209ENST00000559222 GSTO1P78417 241 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 TTLL12Q14166 644 aaPredicted RBP22.78■■□□□ 1.24
CASC4-209ENST00000559222 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 SLF2Q8IX21 1173 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 MAGEB6Q8N7X4 407 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 SH3RF3Q8TEJ3 882 aaPredicted RBP22.78■■□□□ 1.24
CASC4-209ENST00000559222 CAPNS2Q96L46 248 aa22.78■■□□□ 1.24
CASC4-209ENST00000559222 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
CASC4-209ENST00000559222 SLURP2P0DP57 97 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 CYP7A1P22680 504 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 TNNI2P48788 182 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 FKBP1CQ5VVH2 108 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 FAM83AQ86UY5 434 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 ZIC5Q96T25 663 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 PAG1Q9NWQ8 432 aa22.77■■□□□ 1.24
CASC4-209ENST00000559222 AATFQ9NY61 560 aaKnown RBP eCLIP22.77■■□□□ 1.24
CASC4-209ENST00000559222 ANGEL1Q9UNK9 670 aaKnown RBP22.77■■□□□ 1.24
CASC4-209ENST00000559222 WDR33Q9C0J8 1336 aaKnown RBP22.77■■□□□ 1.24
CASC4-209ENST00000559222 RPAP1Q9BWH6 1393 aaPredicted RBP22.76■■□□□ 1.23
CASC4-209ENST00000559222 LDHCP07864 332 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 NF2P35240 595 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 PICALMQ13492 652 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 SH3BP5LQ7L8J4 393 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 JMYQ8N9B5 988 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 MIGA1Q8NAN2 632 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 PI4K2BQ8TCG2 481 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 LNPKQ9C0E8 428 aa22.76■■□□□ 1.23
CASC4-209ENST00000559222 FAM155AB1AL88 458 aaPredicted RBP22.75■■□□□ 1.23
CASC4-209ENST00000559222 MAP4K4O95819 1239 aaPredicted RBP22.75■■□□□ 1.23
CASC4-209ENST00000559222 PDE6AP16499 860 aa22.75■■□□□ 1.23
CASC4-209ENST00000559222 FAM151AQ8WW52 585 aa22.75■■□□□ 1.23
CASC4-209ENST00000559222 IDI2Q9BXS1 227 aa22.75■■□□□ 1.23
CASC4-209ENST00000559222 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.75■■□□□ 1.23
CASC4-209ENST00000559222 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
CASC4-209ENST00000559222 USP2O75604 605 aaPredicted RBP22.74■■□□□ 1.23
CASC4-209ENST00000559222 FKBP1BP68106 108 aa22.74■■□□□ 1.23
CASC4-209ENST00000559222 RGMBQ6NW40 437 aa22.74■■□□□ 1.23
CASC4-209ENST00000559222 HHIPL1Q96JK4 782 aa22.74■■□□□ 1.23
CASC4-209ENST00000559222 CLMNQ96JQ2 1002 aa22.74■■□□□ 1.23
CASC4-209ENST00000559222 TCRBV5S4A2TA0A5A2 114 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 MX1P20591 662 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 MAP3K12Q12852 859 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 TTF1Q15361 905 aaPredicted RBP22.73■■□□□ 1.23
CASC4-209ENST00000559222 SUPT20HL1Q3ZLR7 823 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 RASAL3Q86YV0 1011 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 TEX11Q8IYF3 940 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 PCNTO95613 3336 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 ATRNL1Q5VV63 1379 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 NAV1Q8NEY1 1877 aa22.73■■□□□ 1.23
CASC4-209ENST00000559222 DDTLA6NHG4 134 aaPredicted RBP22.72■■□□□ 1.23
CASC4-209ENST00000559222 ZNF157P51786 506 aaPredicted RBP22.72■■□□□ 1.23
CASC4-209ENST00000559222 LDLRAD1Q5T700 205 aa22.72■■□□□ 1.23
CASC4-209ENST00000559222 SLC9C2Q5TAH2 1124 aa22.72■■□□□ 1.23
CASC4-209ENST00000559222 ZNF532Q9HCE3 1301 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms