RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
CLPX-204ENST00000559152 MAGEB6P1A0A0J9YX57 407 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 ERICH2A1L162 156 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
CLPX-204ENST00000559152 GYG1P46976 350 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 RCAN1P53805 252 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 LCORLQ8N3X6 602 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
CLPX-204ENST00000559152 ABCF2Q9UG63 623 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 NEDD4P46934 1319 aa13.16□□□□□ -0.3
CLPX-204ENST00000559152 KDM4AO75164 1064 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
CLPX-204ENST00000559152 FOSBP53539 338 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 WASF1Q92558 559 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
CLPX-204ENST00000559152 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 ZSWIM5Q9P217 1185 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 TIAM2Q8IVF5 1701 aa13.15□□□□□ -0.3
CLPX-204ENST00000559152 YEATS4O95619 227 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 RFC4P35249 363 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 KCNQ4P56696 695 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 GUCY1B3Q02153 619 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.31
CLPX-204ENST00000559152 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.31
CLPX-204ENST00000559152 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 NR1I2O75469 434 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 PTMAP06454 111 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 ME1P48163 572 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 TYRO3Q06418 890 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 TRIM29Q14134 588 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 CAMK4Q16566 473 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
CLPX-204ENST00000559152 NID2Q14112 1375 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 BTAF1O14981 1849 aa13.14□□□□□ -0.31
CLPX-204ENST00000559152 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 NPHP1O15259 732 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
CLPX-204ENST00000559152 ADRA2BP18089 450 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
CLPX-204ENST00000559152 PPARAQ07869 468 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
CLPX-204ENST00000559152 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 PRKAB2O43741 272 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
CLPX-204ENST00000559152 WTAPQ15007 396 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 ESR2Q92731 530 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
CLPX-204ENST00000559152 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 STK38Q15208 465 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 ADCY5O95622 1261 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 KIF23Q02241 960 aaPredicted RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
CLPX-204ENST00000559152 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 MRVI1Q9Y6F6 885 aa13.12□□□□□ -0.31
CLPX-204ENST00000559152 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 TPM3P06753 285 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 IFNAR1P17181 557 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 NT5C2P49902 561 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 MRPS27Q92552 414 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms