RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 DPF3Q92784 378 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 ARHGAP39Q9C0H5 1083 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 BRCA2P51587 3418 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 RPAP1Q9BWH6 1393 aaPredicted RBP20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 H0YGN5 161 aa20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 FMNL1O95466 1100 aaPredicted RBP20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 PSMC4P43686 418 aa20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 C17orf99Q6UX52 265 aa20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 WDR66Q8TBY9 1149 aa20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 SRRDQ9UH36 339 aa20.03■□□□□ 0.8
CDC42BPB-203ENST00000558867 KIF16BQ96L93 1317 aa20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 NBPF7P0C2Y1 421 aaPredicted RBP20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 GRIK5Q16478 980 aa20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 FAM151AQ8WW52 585 aa20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 TRIM47Q96LD4 638 aa20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 HTATIP2Q9BUP3 242 aa20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.8
CDC42BPB-203ENST00000558867 UTYO14607 1347 aa20.02■□□□□ 0.79
CDC42BPB-203ENST00000558867 PDHXO00330 501 aa20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 BCAMP50895 628 aa20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 UBXN2AP68543 259 aa20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 PUM3Q15397 648 aaKnown RBP20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 RABL6Q3YEC7 729 aaPredicted RBP20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 BIN2Q9UBW5 565 aaPredicted RBP20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 CPA4Q9UI42 421 aa20.01■□□□□ 0.79
CDC42BPB-203ENST00000558867 GRK4P32298 578 aa20■□□□□ 0.79
CDC42BPB-203ENST00000558867 LRRC24Q50LG9 513 aa20■□□□□ 0.79
CDC42BPB-203ENST00000558867 MIGA2Q7L4E1 593 aa20■□□□□ 0.79
CDC42BPB-203ENST00000558867 KAZALD1Q96I82 304 aa20■□□□□ 0.79
CDC42BPB-203ENST00000558867 PARK7Q99497 189 aaKnown RBP20■□□□□ 0.79
CDC42BPB-203ENST00000558867 ZNF521Q96K83 1311 aa20■□□□□ 0.79
CDC42BPB-203ENST00000558867 SLC5A1P13866 664 aa19.99■□□□□ 0.79
CDC42BPB-203ENST00000558867 NR2E3Q9Y5X4 410 aa19.99■□□□□ 0.79
CDC42BPB-203ENST00000558867 MYPNQ86TC9 1320 aa19.99■□□□□ 0.79
CDC42BPB-203ENST00000558867 ECM2O94769 699 aaPredicted RBP19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 CAPN2P17655 700 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 OSBPP22059 807 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 INPP5BP32019 993 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 FCGRTP55899 365 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 CHRDL2Q6WN34 429 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 VGLL2Q8N8G2 317 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 KCNH4Q9UQ05 1017 aa19.98■□□□□ 0.79
CDC42BPB-203ENST00000558867 CXCL11O14625 94 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 GJB1P08034 283 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 GJA8P48165 433 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 MTFR1Q15390 333 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 LPIN2Q92539 896 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 GNL3LQ9NVN8 582 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 ZNF112Q9UJU3 913 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 TRIOBPQ9H2D6 2365 aa19.97■□□□□ 0.79
CDC42BPB-203ENST00000558867 FASTKD5Q7L8L6 764 aaKnown RBP19.96■□□□□ 0.79
CDC42BPB-203ENST00000558867 SLAIN1Q8ND83 568 aa19.96■□□□□ 0.79
CDC42BPB-203ENST00000558867 PTPRCP08575 1304 aa19.96■□□□□ 0.79
CDC42BPB-203ENST00000558867 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
CDC42BPB-203ENST00000558867 CCL5P13501 91 aa19.95■□□□□ 0.78
CDC42BPB-203ENST00000558867 TCP10Q12799 353 aa19.95■□□□□ 0.78
CDC42BPB-203ENST00000558867 NOL9Q5SY16 702 aaKnown RBP19.95■□□□□ 0.78
CDC42BPB-203ENST00000558867 ANKRD44Q8N8A2 993 aa19.95■□□□□ 0.78
CDC42BPB-203ENST00000558867 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
CDC42BPB-203ENST00000558867 LDHBP07195 334 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-203ENST00000558867 FGFR2P21802 821 aa19.94■□□□□ 0.78
CDC42BPB-203ENST00000558867 PICK1Q9NRD5 415 aa19.94■□□□□ 0.78
CDC42BPB-203ENST00000558867 EYA2O00167 538 aa19.93■□□□□ 0.78
CDC42BPB-203ENST00000558867 CDC42EP5Q6NZY7 148 aa19.93■□□□□ 0.78
CDC42BPB-203ENST00000558867 SHISA4Q96DD7 197 aa19.93■□□□□ 0.78
CDC42BPB-203ENST00000558867 USP40Q9NVE5 1235 aa19.93■□□□□ 0.78
CDC42BPB-203ENST00000558867 DAGLAQ9Y4D2 1042 aa19.93■□□□□ 0.78
CDC42BPB-203ENST00000558867 KLHDC4Q8TBB5 520 aa19.92■□□□□ 0.78
CDC42BPB-203ENST00000558867 ADGRA2Q96PE1 1338 aa19.92■□□□□ 0.78
CDC42BPB-203ENST00000558867 ZSWIM8A7E2V4 1837 aa19.92■□□□□ 0.78
CDC42BPB-203ENST00000558867 NEFLP07196 543 aa19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 CTGFP29279 349 aa19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 PRKCZQ05513 592 aa19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 ZGPATQ8N5A5 531 aaKnown RBP19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 RBM27Q9P2N5 1060 aaKnown RBP19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
CDC42BPB-203ENST00000558867 SEMA3EO15041 775 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 FARP2O94887 1054 aaPredicted RBP19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 BCRP11274 1271 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 ERICH6BQ5W0A0 696 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 SLF2Q8IX21 1173 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 CEP126Q9P2H0 1117 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 DENND2AQ9ULE3 1009 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 HDAC5Q9UQL6 1122 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 SLC45A1Q9Y2W3 748 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 LRRFIP2Q9Y608 721 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 ZHX2Q9Y6X8 837 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
CDC42BPB-203ENST00000558867 SGPL1O95470 568 aa19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 NFIAQ12857 509 aa19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 DIXDC1Q155Q3 683 aa19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 ZSCAN29Q8IWY8 852 aaPredicted RBP19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 SCYL3Q8IZE3 742 aa19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 MRPL50Q8N5N7 158 aaKnown RBP19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 SMCR8Q8TEV9 937 aaPredicted RBP19.89■□□□□ 0.77
CDC42BPB-203ENST00000558867 USP44Q9H0E7 712 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms