RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 WDR90Q96KV7 1748 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 PSME4Q14997 1843 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
PSMA4-207ENST00000558635 MX1P20591 662 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 PRDX5P30044 214 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
PSMA4-207ENST00000558635 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
PSMA4-207ENST00000558635 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
PSMA4-207ENST00000558635 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
PSMA4-207ENST00000558635 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
PSMA4-207ENST00000558635 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 KIF3CO14782 793 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 EGFRP00533 1210 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 MMP14P50281 582 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
PSMA4-207ENST00000558635 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
PSMA4-207ENST00000558635 TMEM92Q6UXU6 159 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
PSMA4-207ENST00000558635 HAUS7Q99871 368 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 PIH1D3Q9NQM4 214 aaKnown RBP12.65□□□□□ -0.38
PSMA4-207ENST00000558635 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
PSMA4-207ENST00000558635 GOLIM4O00461 696 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 ERC2O15083 957 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PDE4AP27815 886 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PDE1AP54750 535 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PNMA8AQ86V59 439 aaPredicted RBP12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PI4K2BQ8TCG2 481 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 EDC3Q96F86 508 aaKnown RBP12.64□□□□□ -0.39
PSMA4-207ENST00000558635 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
PSMA4-207ENST00000558635 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
PSMA4-207ENST00000558635 CRKP46108 304 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 RBM5P52756 815 aaKnown RBP eCLIP12.63□□□□□ -0.39
PSMA4-207ENST00000558635 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
PSMA4-207ENST00000558635 MECOMQ03112 1051 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 DLGAP5Q15398 846 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
PSMA4-207ENST00000558635 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 PAG1Q9NWQ8 432 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
PSMA4-207ENST00000558635 MAST3O60307 1309 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 SCN4AP35499 1836 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 MAP4K4O95819 1239 aaPredicted RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 ZNF384Q8TF68 577 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
PSMA4-207ENST00000558635 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
PSMA4-207ENST00000558635 WNT10BO00744 389 aa12.61□□□□□ -0.39
PSMA4-207ENST00000558635 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
PSMA4-207ENST00000558635 LDHDQ86WU2 507 aa12.61□□□□□ -0.39
PSMA4-207ENST00000558635 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
PSMA4-207ENST00000558635 PRMT6Q96LA8 375 aaPredicted RBP12.61□□□□□ -0.39
PSMA4-207ENST00000558635 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
PSMA4-207ENST00000558635 AOX1Q06278 1338 aa12.61□□□□□ -0.39
PSMA4-207ENST00000558635 GSTO1P78417 241 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
PSMA4-207ENST00000558635 APOBEC3HQ6NTF7 200 aaKnown RBP12.6□□□□□ -0.39
PSMA4-207ENST00000558635 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 ZDHHC15Q96MV8 337 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 DAGLAQ9Y4D2 1042 aa12.6□□□□□ -0.39
PSMA4-207ENST00000558635 IGSF3O75054 1194 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 TOMM70O94826 608 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 LDHCP07864 332 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
PSMA4-207ENST00000558635 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
PSMA4-207ENST00000558635 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 GAKO14976 1311 aa12.59□□□□□ -0.39
PSMA4-207ENST00000558635 CLRN2A0PK11 232 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 PDE6AP16499 860 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 CYP7A1P22680 504 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
PSMA4-207ENST00000558635 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
PSMA4-207ENST00000558635 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-207ENST00000558635 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms