RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 RGMBQ6NW40 437 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 SIRT2Q8IXJ6 389 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 HOOK2Q96ED9 719 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 HMG20BQ9P0W2 317 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 EXOC6BQ9Y2D4 811 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
TPM1-213ENST00000558400 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 PRDX5P30044 214 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 ZNF157P51786 506 aaPredicted RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 NOGQ13253 232 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 DGKZQ13574 1117 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 TTLL12Q14166 644 aaPredicted RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 TMED8Q6PL24 325 aaPredicted RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 DLK2Q6UY11 383 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 FAM83AQ86UY5 434 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 DZIP1Q86YF9 867 aaKnown RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 EAF2Q96CJ1 260 aaPredicted RBP10.38□□□□□ -0.75
TPM1-213ENST00000558400 DBNDD2Q9BQY9 259 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 LRP2BPQ9P2M1 347 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
TPM1-213ENST00000558400 POLR2AP24928 1970 aaKnown RBP10.37□□□□□ -0.75
TPM1-213ENST00000558400 COL1A1P02452 1464 aaPredicted RBP10.37□□□□□ -0.75
TPM1-213ENST00000558400 CA12O43570 354 aa10.37□□□□□ -0.75
TPM1-213ENST00000558400 IFIT2P09913 472 aaKnown RBP10.37□□□□□ -0.75
TPM1-213ENST00000558400 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
TPM1-213ENST00000558400 CYP4F22Q6NT55 531 aa10.37□□□□□ -0.75
TPM1-213ENST00000558400 AACSQ86V21 672 aa10.37□□□□□ -0.75
TPM1-213ENST00000558400 CCDC8Q9H0W5 538 aaPredicted RBP10.37□□□□□ -0.75
TPM1-213ENST00000558400 A0A1B0GUL6 1792 aa10.37□□□□□ -0.75
TPM1-213ENST00000558400 TCP10L2B9ZVM9 353 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 MCAMP43121 646 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 IREB2P48200 963 aaKnown RBP10.36□□□□□ -0.75
TPM1-213ENST00000558400 GRM1Q13255 1194 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 MAP3K11Q16584 847 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 DCTPP1Q9H773 170 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 USP40Q9NVE5 1235 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 RAI14Q9P0K7 980 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 DBNLQ9UJU6 430 aaKnown RBP10.36□□□□□ -0.75
TPM1-213ENST00000558400 SCAF8Q9UPN6 1271 aaKnown RBP10.36□□□□□ -0.75
TPM1-213ENST00000558400 DAGLAQ9Y4D2 1042 aa10.36□□□□□ -0.75
TPM1-213ENST00000558400 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 GPR75-ASB3A0A0A6YYF3 556 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 UBE2Q2LH0YL09 131 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 BAG3O95817 575 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 SOX10P56693 466 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 MECOMQ03112 1051 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 TTF1Q15361 905 aaPredicted RBP10.35□□□□□ -0.75
TPM1-213ENST00000558400 DIXDC1Q155Q3 683 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 NBPF12Q5TAG4 269 aaPredicted RBP10.35□□□□□ -0.75
TPM1-213ENST00000558400 CDC42EP5Q6NZY7 148 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.35□□□□□ -0.75
TPM1-213ENST00000558400 FAM151AQ8WW52 585 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 SLC10A4Q96EP9 437 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 NOL10Q9BSC4 688 aaKnown RBP10.35□□□□□ -0.75
TPM1-213ENST00000558400 IL1RAPL2Q9NP60 686 aa10.35□□□□□ -0.75
TPM1-213ENST00000558400 ANGEL1Q9UNK9 670 aaKnown RBP10.35□□□□□ -0.75
TPM1-213ENST00000558400 GAKO14976 1311 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 APBB1O00213 710 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 USP2O75604 605 aaPredicted RBP10.34□□□□□ -0.75
TPM1-213ENST00000558400 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
TPM1-213ENST00000558400 PLCG2P16885 1265 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 INHBEP58166 350 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 CERS3Q8IU89 383 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 NSUN4Q96CB9 384 aaKnown RBP10.34□□□□□ -0.75
TPM1-213ENST00000558400 IDI2Q9BXS1 227 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
TPM1-213ENST00000558400 FAM155AB1AL88 458 aaPredicted RBP10.33□□□□□ -0.76
TPM1-213ENST00000558400 AOC2O75106 756 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 ENTPD3O75355 529 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 SLC10A3P09131 477 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 ZAP70P43403 619 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 MAP3K12Q12852 859 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 PRKG1Q13976 671 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 NAA16Q6N069 864 aaPredicted RBP10.33□□□□□ -0.76
TPM1-213ENST00000558400 PI16Q6UXB8 463 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 TEPSINQ96N21 525 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 TMEM39BQ9GZU3 492 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
TPM1-213ENST00000558400 ZNF646O15015 1829 aaPredicted RBP10.33□□□□□ -0.76
TPM1-213ENST00000558400 MROH7-TTC4A0A0A0MT08 1334 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 AOX1Q06278 1338 aa10.33□□□□□ -0.76
TPM1-213ENST00000558400 ATP5JP18859 108 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 BTDP43251 543 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 CACNB3P54284 484 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 PPP4CP60510 307 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 KIF23Q02241 960 aaPredicted RBP10.32□□□□□ -0.76
TPM1-213ENST00000558400 MOB2Q70IA6 237 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 GPATCH3Q96I76 525 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 CRBNQ96SW2 442 aa10.32□□□□□ -0.76
TPM1-213ENST00000558400 TLR7Q9NYK1 1049 aaKnown RBP10.32□□□□□ -0.76
TPM1-213ENST00000558400 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms