RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
ZEB1-210ENST00000557827 EFHC2Q5JST6 749 aa9.35□□□□□ -0.91
ZEB1-210ENST00000557827 MRM1Q6IN84 353 aaKnown RBP9.35□□□□□ -0.91
ZEB1-210ENST00000557827 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
ZEB1-210ENST00000557827 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
ZEB1-210ENST00000557827 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
ZEB1-210ENST00000557827 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
ZEB1-210ENST00000557827 GDF9O60383 454 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 FAM153BP0C7A2 387 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 MYCLP1P12525 358 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-210ENST00000557827 THNSL2Q86YJ6 484 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 GRIN3AQ8TCU5 1115 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 CHAC2Q8WUX2 184 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 PMM1Q92871 262 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 NINJ1Q92982 152 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 MFSD3Q96ES6 412 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-210ENST00000557827 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
ZEB1-210ENST00000557827 FIGNL2A6NMB9 653 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 PRC1O43663 620 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 GRIN3BO60391 1043 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 STAT3P40763 770 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
ZEB1-210ENST00000557827 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 LLGL2Q6P1M3 1020 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
ZEB1-210ENST00000557827 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
ZEB1-210ENST00000557827 RAVER1Q8IY67 606 aaKnown RBP9.33□□□□□ -0.92
ZEB1-210ENST00000557827 NIM1KQ8IY84 436 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 C8orf48Q96LL4 319 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 PBX4Q9BYU1 374 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 CLEC4MQ9H2X3 399 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-210ENST00000557827 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
ZEB1-210ENST00000557827 ARNTP27540 789 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
ZEB1-210ENST00000557827 FIGNL1Q6PIW4 674 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 EEPD1Q7L9B9 569 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 GAL3ST3Q96A11 431 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 TM9SF2Q99805 663 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 SPATA9Q9BWV2 254 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 CBX8Q9HC52 389 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 PCDHGC4Q9Y5F7 938 aa9.32□□□□□ -0.92
ZEB1-210ENST00000557827 A0A087X0B3 334 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 DCDC2BA2VCK2 349 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 GUCY2CP25092 1073 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 NRLP54845 237 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 SIK1P57059 783 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 TNP2Q05952 138 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 SPEM2Q0P670 501 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 LAMC2Q13753 1193 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 LONRF2Q1L5Z9 754 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 FAM9AQ8IZU1 332 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-210ENST00000557827 BHMTQ93088 406 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 CAAP1Q9H8G2 361 aa9.31□□□□□ -0.92
ZEB1-210ENST00000557827 J3QW42 95 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 TNFRSF10AO00220 468 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 IRS4O14654 1257 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-210ENST00000557827 ATP11AP98196 1134 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 NFKB2Q00653 900 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
ZEB1-210ENST00000557827 ZNF423Q2M1K9 1284 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
ZEB1-210ENST00000557827 HGSNATQ68CP4 663 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 SMC5Q8IY18 1101 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 ZBTB38Q8NAP3 1195 aaPredicted RBP9.3□□□□□ -0.92
ZEB1-210ENST00000557827 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 BSNDQ8WZ55 320 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 SLC26A8Q96RN1 970 aa9.3□□□□□ -0.92
ZEB1-210ENST00000557827 POP1Q99575 1024 aaKnown RBP9.3□□□□□ -0.92
ZEB1-210ENST00000557827 ADCY3O60266 1144 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 B3GALT4O96024 378 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
ZEB1-210ENST00000557827 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 CBX2Q14781 532 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-210ENST00000557827 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 MRPL14Q6P1L8 145 aaKnown RBP9.29□□□□□ -0.92
ZEB1-210ENST00000557827 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
ZEB1-210ENST00000557827 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 EMILIN2Q9BXX0 1053 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 MARK1Q9P0L2 795 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 HCN2Q9UL51 889 aa9.29□□□□□ -0.92
ZEB1-210ENST00000557827 MEIS3P2A8K0S8 358 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 ZBTB42B2RXF5 422 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 ALG1L2C9J202 215 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 ZNF252P-AS1Q0IIN9 211 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZEB1-210ENST00000557827 FAM50AQ14320 339 aaKnown RBP9.28□□□□□ -0.92
ZEB1-210ENST00000557827 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
ZEB1-210ENST00000557827 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-210ENST00000557827 UBR7Q8N806 425 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms