RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 ABT1Q9ULW3 272 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 LAMB1P07942 1786 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 THSD7BQ9C0I4 1608 aa12.89□□□□□ -0.35
HNRNPC-232ENST00000557442 TCP10L2B9ZVM9 353 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 IGHDP01880 384 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 ATP5JP18859 108 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 BTDP43251 543 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 ZNF384Q8TF68 577 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 PPP2R3BQ9Y5P8 575 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 DDX60LQ5H9U9 1706 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 GOLIM4O00461 696 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 LDHCP07864 332 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 NF2P35240 595 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 TNNI2P48788 182 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 RASA3Q14644 834 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
HNRNPC-232ENST00000557442 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 MX1P20591 662 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 HAUS7Q99871 368 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
HNRNPC-232ENST00000557442 TTC41PQ6P2S7 1318 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 RFX7Q2KHR2 1363 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 GPR75-ASB3A0A0A6YYF3 556 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 IGSF3O75054 1194 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 FKBP1CQ5VVH2 108 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 MAGEB6Q8N7X4 407 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 TLL2Q9Y6L7 1015 aa12.86□□□□□ -0.35
HNRNPC-232ENST00000557442 ERC2O15083 957 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 NEFLP07196 543 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 CYP7A1P22680 504 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 HUNKP57058 714 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 TCP10Q12799 353 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 NFIAQ12857 509 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 ADGRA1Q86SQ6 560 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 FAM83AQ86UY5 434 aa12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 AATFQ9NY61 560 aaKnown RBP eCLIP12.85□□□□□ -0.35
HNRNPC-232ENST00000557442 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 RASSF10A6NK89 507 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 BAG3O95817 575 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 PDE6AP16499 860 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 FKBP1BP68106 108 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 NUCB1Q02818 461 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 PICALMQ13492 652 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 PRKG1Q13976 671 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 PI4K2BQ8TCG2 481 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.84□□□□□ -0.35
HNRNPC-232ENST00000557442 PTPRFP10586 1907 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 PLCG2P16885 1265 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 RGS3P49796 1198 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 RHBDL3P58872 404 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 GRM1Q13255 1194 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 TMED8Q6PL24 325 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 TEX11Q8IYF3 940 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 KLRG1Q96E93 195 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 IDI2Q9BXS1 227 aa12.83□□□□□ -0.36
HNRNPC-232ENST00000557442 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms