RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
SHMT2-230ENST00000557427 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
SHMT2-230ENST00000557427 H7C1W4 665 aa15.73■□□□□ 0.11
SHMT2-230ENST00000557427 FLIIQ13045 1269 aa15.73■□□□□ 0.11
SHMT2-230ENST00000557427 FKBP5Q13451 457 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-230ENST00000557427 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
SHMT2-230ENST00000557427 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
SHMT2-230ENST00000557427 PAWRQ96IZ0 340 aaKnown RBP15.73■□□□□ 0.11
SHMT2-230ENST00000557427 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
SHMT2-230ENST00000557427 ZMYND8Q9ULU4 1186 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-230ENST00000557427 PDHXO00330 501 aa15.72■□□□□ 0.11
SHMT2-230ENST00000557427 TFRCP02786 760 aaKnown RBP15.72■□□□□ 0.11
SHMT2-230ENST00000557427 PPIL2Q13356 520 aa15.72■□□□□ 0.11
SHMT2-230ENST00000557427 MOGSQ13724 837 aa15.72■□□□□ 0.11
SHMT2-230ENST00000557427 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
SHMT2-230ENST00000557427 DEFB118Q96PH6 123 aa15.72■□□□□ 0.11
SHMT2-230ENST00000557427 SERPINA10Q9UK55 444 aa15.72■□□□□ 0.11
SHMT2-230ENST00000557427 CSF1RP07333 972 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 ELNP15502 786 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 ANKRD23Q86SG2 305 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-230ENST00000557427 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 WRNIP1Q96S55 665 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 CRISPLD2Q9H0B8 497 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 TTF2Q9UNY4 1162 aaKnown RBP15.71■□□□□ 0.11
SHMT2-230ENST00000557427 EYSQ5T1H1 3165 aa15.71■□□□□ 0.11
SHMT2-230ENST00000557427 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 E9PSI1 815 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 ADCY3O60266 1144 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 BCRP11274 1271 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 CACNB3P54284 484 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 GRIK5Q16478 980 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 ZNF804AQ7Z570 1209 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 C7orf61Q8IZ16 206 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-230ENST00000557427 A0A1B0GUL6 1792 aa15.7■□□□□ 0.1
SHMT2-230ENST00000557427 FAM205AQ6ZU69 1335 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 F6X3S4 739 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 INHAP05111 366 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 SYN1P17600 705 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 MAGEA10P43363 369 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-230ENST00000557427 CASP7P55210 303 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 TDHQ8IZJ6 230 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 GUCD1Q96NT3 240 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 MGAMO43451 1857 aa15.69■□□□□ 0.1
SHMT2-230ENST00000557427 CRKP46108 304 aa15.68■□□□□ 0.1
SHMT2-230ENST00000557427 TNNI2P48788 182 aa15.68■□□□□ 0.1
SHMT2-230ENST00000557427 FCGRTP55899 365 aa15.68■□□□□ 0.1
SHMT2-230ENST00000557427 PPATQ06203 517 aa15.68■□□□□ 0.1
SHMT2-230ENST00000557427 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
SHMT2-230ENST00000557427 CYP2C8P10632 490 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 INPP5BP32019 993 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 FLT3LGP49771 235 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 GCKRQ14397 625 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 TDRD7Q8NHU6 1098 aaKnown RBP15.67■□□□□ 0.1
SHMT2-230ENST00000557427 KCNH4Q9UQ05 1017 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
SHMT2-230ENST00000557427 GPAT2Q6NUI2 795 aa15.66■□□□□ 0.1
SHMT2-230ENST00000557427 NECAB2Q7Z6G3 386 aa15.66■□□□□ 0.1
SHMT2-230ENST00000557427 PXYLP1Q8TE99 480 aa15.66■□□□□ 0.1
SHMT2-230ENST00000557427 LAMA2P24043 3122 aaKnown RBP15.65■□□□□ 0.1
SHMT2-230ENST00000557427 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
SHMT2-230ENST00000557427 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
SHMT2-230ENST00000557427 MIGA2Q7L4E1 593 aa15.65■□□□□ 0.1
SHMT2-230ENST00000557427 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
SHMT2-230ENST00000557427 PRUNE2Q8WUY3 3088 aa15.64■□□□□ 0.09
SHMT2-230ENST00000557427 ANKRD18BA2A2Z9 1011 aa15.64■□□□□ 0.09
SHMT2-230ENST00000557427 CAPN2P17655 700 aa15.64■□□□□ 0.09
SHMT2-230ENST00000557427 IRF5Q13568 498 aa15.64■□□□□ 0.09
SHMT2-230ENST00000557427 UBE2OQ9C0C9 1292 aaKnown RBP15.64■□□□□ 0.09
SHMT2-230ENST00000557427 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SHMT2-230ENST00000557427 GYG1P46976 350 aa15.63■□□□□ 0.09
SHMT2-230ENST00000557427 BEND3Q5T5X7 828 aa15.63■□□□□ 0.09
SHMT2-230ENST00000557427 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
SHMT2-230ENST00000557427 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
SHMT2-230ENST00000557427 PLIN1O60240 522 aa15.62■□□□□ 0.09
SHMT2-230ENST00000557427 FAM83AQ86UY5 434 aa15.62■□□□□ 0.09
SHMT2-230ENST00000557427 MRPL50Q8N5N7 158 aaKnown RBP15.62■□□□□ 0.09
SHMT2-230ENST00000557427 FAM84BQ96KN1 310 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-230ENST00000557427 PARK7Q99497 189 aaKnown RBP15.62■□□□□ 0.09
SHMT2-230ENST00000557427 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.62■□□□□ 0.096e-7■□□□□ 9.5
SHMT2-230ENST00000557427 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
SHMT2-230ENST00000557427 MUC3AQ02505 3323 aa15.62■□□□□ 0.09
SHMT2-230ENST00000557427 DOCK3Q8IZD9 2030 aa15.61■□□□□ 0.09
SHMT2-230ENST00000557427 FOXO4P98177 505 aa15.61■□□□□ 0.09
SHMT2-230ENST00000557427 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-230ENST00000557427 ANKLE1Q8NAG6 615 aa15.61■□□□□ 0.09
SHMT2-230ENST00000557427 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
SHMT2-230ENST00000557427 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-230ENST00000557427 ZNF341Q9BYN7 854 aa15.61■□□□□ 0.09
SHMT2-230ENST00000557427 APOBEC3HQ6NTF7 200 aaKnown RBP15.6■□□□□ 0.09
SHMT2-230ENST00000557427 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
SHMT2-230ENST00000557427 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
SHMT2-230ENST00000557427 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-230ENST00000557427 COL2A1P02458 1487 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-230ENST00000557427 TNPO2O14787 897 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms