RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
VPS33B-206ENST00000557358 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
VPS33B-206ENST00000557358 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
VPS33B-206ENST00000557358 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
VPS33B-206ENST00000557358 MCAMP43121 646 aa16.87■□□□□ 0.29
VPS33B-206ENST00000557358 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
VPS33B-206ENST00000557358 ANKRD13AQ8IZ07 590 aa16.87■□□□□ 0.29
VPS33B-206ENST00000557358 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
VPS33B-206ENST00000557358 FAM163AQ96GL9 167 aaPredicted RBP16.87■□□□□ 0.29
VPS33B-206ENST00000557358 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
VPS33B-206ENST00000557358 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
VPS33B-206ENST00000557358 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
VPS33B-206ENST00000557358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
VPS33B-206ENST00000557358 PCNTO95613 3336 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 BAG3O95817 575 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 CACNB3P54284 484 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
VPS33B-206ENST00000557358 MECOMQ03112 1051 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 RASAL3Q86YV0 1011 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
VPS33B-206ENST00000557358 CSADQ9Y600 493 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
VPS33B-206ENST00000557358 THSD7BQ9C0I4 1608 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
VPS33B-206ENST00000557358 FOXN1O15353 648 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 PLCG2P16885 1265 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 BTDP43251 543 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 NAA16Q6N069 864 aaPredicted RBP16.85■□□□□ 0.29
VPS33B-206ENST00000557358 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
VPS33B-206ENST00000557358 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
VPS33B-206ENST00000557358 GAKO14976 1311 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 AOX1Q06278 1338 aa16.85■□□□□ 0.29
VPS33B-206ENST00000557358 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
VPS33B-206ENST00000557358 TCP10Q12799 353 aa16.84■□□□□ 0.29
VPS33B-206ENST00000557358 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-206ENST00000557358 TMED8Q6PL24 325 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-206ENST00000557358 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
VPS33B-206ENST00000557358 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
VPS33B-206ENST00000557358 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
VPS33B-206ENST00000557358 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-206ENST00000557358 ENTPD3O75355 529 aa16.83■□□□□ 0.28
VPS33B-206ENST00000557358 MAP3K9P80192 1104 aa16.83■□□□□ 0.28
VPS33B-206ENST00000557358 MAP3K12Q12852 859 aa16.83■□□□□ 0.28
VPS33B-206ENST00000557358 AAMPQ13685 434 aa16.83■□□□□ 0.28
VPS33B-206ENST00000557358 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
VPS33B-206ENST00000557358 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
VPS33B-206ENST00000557358 TLR7Q9NYK1 1049 aaKnown RBP16.83■□□□□ 0.28
VPS33B-206ENST00000557358 GPR75-ASB3A0A0A6YYF3 556 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
VPS33B-206ENST00000557358 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
VPS33B-206ENST00000557358 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
VPS33B-206ENST00000557358 ZAP70P43403 619 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 INHBEP58166 350 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 IDI2Q9BXS1 227 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 ZNF341Q9BYN7 854 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
VPS33B-206ENST00000557358 MANSC4A6NHS7 340 aaPredicted RBP16.81■□□□□ 0.28
VPS33B-206ENST00000557358 RGS3P49796 1198 aa16.81■□□□□ 0.28
VPS33B-206ENST00000557358 LBX1P52954 281 aa16.81■□□□□ 0.28
VPS33B-206ENST00000557358 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
VPS33B-206ENST00000557358 OTUD7BQ6GQQ9 843 aa16.81■□□□□ 0.28
VPS33B-206ENST00000557358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS33B-206ENST00000557358 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
VPS33B-206ENST00000557358 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
VPS33B-206ENST00000557358 PICALMQ13492 652 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 SPRYD7Q5W111 196 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 FZD1Q9UP38 647 aa16.8■□□□□ 0.28
VPS33B-206ENST00000557358 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
VPS33B-206ENST00000557358 ALDH1A1P00352 501 aa16.79■□□□□ 0.28
VPS33B-206ENST00000557358 NFIAQ12857 509 aa16.79■□□□□ 0.28
VPS33B-206ENST00000557358 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
VPS33B-206ENST00000557358 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
VPS33B-206ENST00000557358 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
VPS33B-206ENST00000557358 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
VPS33B-206ENST00000557358 TRPA1O75762 1119 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 CYP7A1P22680 504 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 MIGA2Q7L4E1 593 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 TNS4Q8IZW8 715 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.78■□□□□ 0.28
VPS33B-206ENST00000557358 CLMNQ96JQ2 1002 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 DNAJC2Q99543 621 aaKnown RBP16.78■□□□□ 0.28
VPS33B-206ENST00000557358 ELP3Q9H9T3 547 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
VPS33B-206ENST00000557358 MAST2Q6P0Q8 1798 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms