RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FAM83AQ86UY5 434 aa15.25■□□□□ 0.03
SLIRP-209ENST00000557342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
SLIRP-209ENST00000557342 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-209ENST00000557342 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-209ENST00000557342 ZAP70P43403 619 aa15.24■□□□□ 0.03
SLIRP-209ENST00000557342 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
SLIRP-209ENST00000557342 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
SLIRP-209ENST00000557342 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
SLIRP-209ENST00000557342 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
SLIRP-209ENST00000557342 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
SLIRP-209ENST00000557342 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-209ENST00000557342 MAP2K2P36507 400 aa15.23■□□□□ 0.03
SLIRP-209ENST00000557342 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-209ENST00000557342 GRM1Q13255 1194 aa15.23■□□□□ 0.03
SLIRP-209ENST00000557342 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-209ENST00000557342 HOOK2Q96ED9 719 aa15.23■□□□□ 0.03
SLIRP-209ENST00000557342 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-209ENST00000557342 MYH7P12883 1935 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 BTDP43251 543 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 CACNB3P54284 484 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 NOGQ13253 232 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-209ENST00000557342 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-209ENST00000557342 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-209ENST00000557342 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
SLIRP-209ENST00000557342 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
SLIRP-209ENST00000557342 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
SLIRP-209ENST00000557342 CDK5RAP2Q96SN8 1893 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 SSC5DA1L4H1 1573 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 UNCXA6NJT0 531 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 UBE2Q2LH0YL09 131 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 HDAC1Q13547 482 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 PRKG1Q13976 671 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 FAM151AQ8WW52 585 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 PIH1D3Q9NQM4 214 aaKnown RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-209ENST00000557342 OTOFQ9HC10 1997 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
SLIRP-209ENST00000557342 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
SLIRP-209ENST00000557342 BAG3O95817 575 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 SLC10A3P09131 477 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 ATP5JP18859 108 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 ZNF384Q8TF68 577 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
SLIRP-209ENST00000557342 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-209ENST00000557342 ENTPD3O75355 529 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 PLCG2P16885 1265 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 TCP10Q12799 353 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-209ENST00000557342 LAMB1P07942 1786 aa15.19■□□□□ 0.02
SLIRP-209ENST00000557342 AOC2O75106 756 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 USP2O75604 605 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 RGS3P49796 1198 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 RHBDL3P58872 404 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 NFIAQ12857 509 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 RASAL3Q86YV0 1011 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 ANKRD13AQ8IZ07 590 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
SLIRP-209ENST00000557342 BEGAINQ9BUH8 593 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 NDUFB9Q9Y6M9 179 aa15.18■□□□□ 0.02
SLIRP-209ENST00000557342 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 WDHD1O75717 1129 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-209ENST00000557342 CYP7A1P22680 504 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 PPP4CP60510 307 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 SLC10A4Q96EP9 437 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 HAUS7Q99871 368 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 PAG1Q9NWQ8 432 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 WBP1LQ9NX94 342 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLIRP-209ENST00000557342 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
SLIRP-209ENST00000557342 GOLIM4O00461 696 aa15.16■□□□□ 0.02
SLIRP-209ENST00000557342 ZSCAN29Q8IWY8 852 aaPredicted RBP15.16■□□□□ 0.02
SLIRP-209ENST00000557342 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
SLIRP-209ENST00000557342 TEX11Q8IYF3 940 aa15.16■□□□□ 0.02
SLIRP-209ENST00000557342 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
SLIRP-209ENST00000557342 MYH1P12882 1939 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms