RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
RDH11-210ENST00000557331 SLC4A10Q6U841 1118 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
RDH11-210ENST00000557331 FCGRTP55899 365 aa12.82□□□□□ -0.36
RDH11-210ENST00000557331 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
RDH11-210ENST00000557331 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
RDH11-210ENST00000557331 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
RDH11-210ENST00000557331 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
RDH11-210ENST00000557331 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
RDH11-210ENST00000557331 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
RDH11-210ENST00000557331 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
RDH11-210ENST00000557331 PDHXO00330 501 aa12.81□□□□□ -0.36
RDH11-210ENST00000557331 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
RDH11-210ENST00000557331 NOL9Q5SY16 702 aaKnown RBP12.81□□□□□ -0.36
RDH11-210ENST00000557331 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
RDH11-210ENST00000557331 BIN2Q9UBW5 565 aaPredicted RBP12.81□□□□□ -0.36
RDH11-210ENST00000557331 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
RDH11-210ENST00000557331 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
RDH11-210ENST00000557331 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
RDH11-210ENST00000557331 ZBTB22O15209 634 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
RDH11-210ENST00000557331 LPIN2Q92539 896 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
RDH11-210ENST00000557331 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
RDH11-210ENST00000557331 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
RDH11-210ENST00000557331 CCL5P13501 91 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 SLC5A1P13866 664 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 OSBPP22059 807 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 BCAMP50895 628 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 UBE2Q1Q7Z7E8 422 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
RDH11-210ENST00000557331 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
RDH11-210ENST00000557331 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 PTPRCP08575 1304 aa12.79□□□□□ -0.36
RDH11-210ENST00000557331 SEMA3EO15041 775 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
RDH11-210ENST00000557331 CACNB3P54284 484 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 IQSEC3Q9UPP2 1182 aaPredicted RBP12.78□□□□□ -0.36
RDH11-210ENST00000557331 ADGRA2Q96PE1 1338 aa12.78□□□□□ -0.36
RDH11-210ENST00000557331 SGPL1O95470 568 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 BCRP11274 1271 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 FGFR2P21802 821 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 INPP5BP32019 993 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 IRF5Q13568 498 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 MTFR1Q15390 333 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 GRIK5Q16478 980 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
RDH11-210ENST00000557331 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
RDH11-210ENST00000557331 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
RDH11-210ENST00000557331 EYA2O00167 538 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 ENTPD3O75355 529 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
RDH11-210ENST00000557331 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
RDH11-210ENST00000557331 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 DAGLAQ9Y4D2 1042 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 SALL1Q9NSC2 1324 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 LAMA3Q16787 3333 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
RDH11-210ENST00000557331 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
RDH11-210ENST00000557331 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
RDH11-210ENST00000557331 ADCY3O60266 1144 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 EVI5O60447 810 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
RDH11-210ENST00000557331 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
RDH11-210ENST00000557331 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 COA7Q96BR5 231 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 IDI2Q9BXS1 227 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 PNMA3Q9UL41 463 aa12.75□□□□□ -0.37
RDH11-210ENST00000557331 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
RDH11-210ENST00000557331 CIAO1O76071 339 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 MAP4K4O95819 1239 aaPredicted RBP12.74□□□□□ -0.37
RDH11-210ENST00000557331 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 PRKCZQ05513 592 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 TCP10Q12799 353 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 MOGSQ13724 837 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
RDH11-210ENST00000557331 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms