RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 TAF1CQ15572 869 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 ZNF333Q96JL9 665 aa13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-230ENST00000557201 MAST3O60307 1309 aa13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 BTBD19C9JJ37 291 aa13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 IRF6O14896 467 aa13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 LPIN2Q92539 896 aa13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 WRNIP1Q96S55 665 aa13.41□□□□□ -0.26
HNRNPC-230ENST00000557201 TLR2O60603 784 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 CETPP11597 493 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 EN2P19622 333 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 PPIL2Q13356 520 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 TMOD2Q9NZR1 351 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 DAGLAQ9Y4D2 1042 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
HNRNPC-230ENST00000557201 SLC5A1P13866 664 aa13.39□□□□□ -0.27
HNRNPC-230ENST00000557201 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
HNRNPC-230ENST00000557201 FAM151AQ8WW52 585 aa13.39□□□□□ -0.27
HNRNPC-230ENST00000557201 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
HNRNPC-230ENST00000557201 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
HNRNPC-230ENST00000557201 CIAO1O76071 339 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 INPP5BP32019 993 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 PPATQ06203 517 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 NFIAQ12857 509 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 CDC42EP5Q6NZY7 148 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 KIAA0100Q14667 2235 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 ZSWIM8A7E2V4 1837 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
HNRNPC-230ENST00000557201 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 PRDX5P30044 214 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 LACTBP83111 547 aaPredicted RBP13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 MOGSQ13724 837 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 C17orf99Q6UX52 265 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 FAM198AQ9UFP1 575 aa13.37□□□□□ -0.27
HNRNPC-230ENST00000557201 CTGFP29279 349 aa13.36□□□□□ -0.27
HNRNPC-230ENST00000557201 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
HNRNPC-230ENST00000557201 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-230ENST00000557201 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
HNRNPC-230ENST00000557201 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
HNRNPC-230ENST00000557201 GNRH1P01148 92 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 PHKA1P46020 1223 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 MYH13Q9UKX3 1938 aa13.35□□□□□ -0.27
HNRNPC-230ENST00000557201 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 SEMA3EO15041 775 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 TCP10Q12799 353 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 SIL1Q9H173 461 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 GAKO14976 1311 aa13.34□□□□□ -0.27
HNRNPC-230ENST00000557201 PHF20L1A8MW92 1017 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 ADORA1P30542 326 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 PRMT2P55345 433 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 MAP3K10Q02779 954 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 IDI2Q9BXS1 227 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 USP40Q9NVE5 1235 aa13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-230ENST00000557201 PDHXO00330 501 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 KIF22Q14807 665 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 CCDC102BQ68D86 513 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 CPA4Q9UI42 421 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 PDS5AQ29RF7 1337 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 CXCL11O14625 94 aa13.32□□□□□ -0.28
HNRNPC-230ENST00000557201 ENTPD3O75355 529 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms