RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
LINC00239-201ENST00000556973 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 MAP4K4O95819 1239 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 ATP5JP18859 108 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 CACNB3P54284 484 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 TTLL12Q14166 644 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 ZNF384Q8TF68 577 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 FAM151AQ8WW52 585 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 TEPSINQ96N21 525 aa13.03□□□□□ -0.32
LINC00239-201ENST00000556973 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
LINC00239-201ENST00000556973 DOCK2Q92608 1830 aa13.02□□□□□ -0.32
LINC00239-201ENST00000556973 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 MAP2K2P36507 400 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 BTDP43251 543 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 ZNF157P51786 506 aaPredicted RBP13.02□□□□□ -0.33
LINC00239-201ENST00000556973 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
LINC00239-201ENST00000556973 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.33
LINC00239-201ENST00000556973 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
LINC00239-201ENST00000556973 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.33
LINC00239-201ENST00000556973 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 BAG3O95817 575 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 PRKG1Q13976 671 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 MOB2Q70IA6 237 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
LINC00239-201ENST00000556973 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 ANTXR1Q9H6X2 564 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 ECHDC1Q9NTX5 307 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
LINC00239-201ENST00000556973 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
LINC00239-201ENST00000556973 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
LINC00239-201ENST00000556973 CEP350Q5VT06 3117 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
LINC00239-201ENST00000556973 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
LINC00239-201ENST00000556973 GRM1Q13255 1194 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 ANKRD45Q5TZF3 282 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 GPATCH3Q96I76 525 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 HAUS7Q99871 368 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
LINC00239-201ENST00000556973 FAM155AB1AL88 458 aaPredicted RBP12.99□□□□□ -0.33
LINC00239-201ENST00000556973 GOLIM4O00461 696 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 ENTPD3O75355 529 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
LINC00239-201ENST00000556973 PLCG2P16885 1265 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
LINC00239-201ENST00000556973 RHBDL3P58872 404 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 PPP4CP60510 307 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 TCP10Q12799 353 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 NFIAQ12857 509 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 NOGQ13253 232 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
LINC00239-201ENST00000556973 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
LINC00239-201ENST00000556973 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 RPAP1Q9BWH6 1393 aaPredicted RBP12.98□□□□□ -0.33
LINC00239-201ENST00000556973 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
LINC00239-201ENST00000556973 IGHDP01880 384 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 SLC10A3P09131 477 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 CYP7A1P22680 504 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
LINC00239-201ENST00000556973 CERS3Q8IU89 383 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 THSD7BQ9C0I4 1608 aa12.98□□□□□ -0.33
LINC00239-201ENST00000556973 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 AOC2O75106 756 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 RGS3P49796 1198 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
LINC00239-201ENST00000556973 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
LINC00239-201ENST00000556973 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 ZFPM1Q8IX07 1006 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 TEX11Q8IYF3 940 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
LINC00239-201ENST00000556973 SH3RF3Q8TEJ3 882 aaPredicted RBP12.97□□□□□ -0.33
LINC00239-201ENST00000556973 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 AATFQ9NY61 560 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00239-201ENST00000556973 FOCADQ5VW36 1801 aa12.97□□□□□ -0.33
LINC00239-201ENST00000556973 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
LINC00239-201ENST00000556973 ERC2O15083 957 aa12.96□□□□□ -0.33
LINC00239-201ENST00000556973 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
LINC00239-201ENST00000556973 PICALMQ13492 652 aa12.96□□□□□ -0.33
LINC00239-201ENST00000556973 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
LINC00239-201ENST00000556973 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms