RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PPIL2Q13356 520 aa21.33■■□□□ 1.01
CHGA-206ENST00000556876 KIF22Q14807 665 aa21.33■■□□□ 1.01
CHGA-206ENST00000556876 CD99L2Q8TCZ2 262 aa21.33■■□□□ 1.01
CHGA-206ENST00000556876 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1.01
CHGA-206ENST00000556876 ARMC5Q96C12 935 aa21.32■■□□□ 1
CHGA-206ENST00000556876 CCER2I3L3R5 266 aa21.31■■□□□ 1
CHGA-206ENST00000556876 IPO8O15397 1037 aaKnown RBP21.31■■□□□ 1
CHGA-206ENST00000556876 GNAI3P08754 354 aa21.31■■□□□ 1
CHGA-206ENST00000556876 CACNB3P54284 484 aa21.31■■□□□ 1
CHGA-206ENST00000556876 GCC1Q96CN9 775 aa21.31■■□□□ 1
CHGA-206ENST00000556876 CDCA7LQ96GN5 454 aa21.31■■□□□ 1
CHGA-206ENST00000556876 COPRSQ9NQ92 184 aa21.31■■□□□ 1
CHGA-206ENST00000556876 PCDH10Q9P2E7 1040 aa21.31■■□□□ 1
CHGA-206ENST00000556876 AKAP2Q9Y2D5 859 aa21.31■■□□□ 1
CHGA-206ENST00000556876 TNRC18O15417 2968 aaPredicted RBP21.31■■□□□ 1
CHGA-206ENST00000556876 TLR2O60603 784 aa21.3■■□□□ 1
CHGA-206ENST00000556876 PRMT2P55345 433 aa21.3■■□□□ 1
CHGA-206ENST00000556876 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
CHGA-206ENST00000556876 CDAN1Q8IWY9 1227 aa21.3■■□□□ 1
CHGA-206ENST00000556876 TMEM106CQ9BVX2 250 aa21.3■■□□□ 1
CHGA-206ENST00000556876 SNCAIPQ9Y6H5 919 aa21.3■■□□□ 1
CHGA-206ENST00000556876 SIL1Q9H173 461 aa21.29■■□□□ 1
CHGA-206ENST00000556876 DAGLAQ9Y4D2 1042 aa21.29■■□□□ 1
CHGA-206ENST00000556876 IRF6O14896 467 aa21.28■■□□□ 1
CHGA-206ENST00000556876 CDC42EP5Q6NZY7 148 aa21.28■■□□□ 1
CHGA-206ENST00000556876 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
CHGA-206ENST00000556876 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
CHGA-206ENST00000556876 ZKSCAN4Q969J2 545 aaPredicted RBP21.28■■□□□ 1
CHGA-206ENST00000556876 USP40Q9NVE5 1235 aa21.28■■□□□ 1
CHGA-206ENST00000556876 ZNF112Q9UJU3 913 aa21.28■■□□□ 1
CHGA-206ENST00000556876 PDS5AQ29RF7 1337 aaKnown RBP21.28■■□□□ 1
CHGA-206ENST00000556876 LRRFIP2Q9Y608 721 aaKnown RBP21.27■■□□□ 1
CHGA-206ENST00000556876 ARAP2Q8WZ64 1704 aa21.26■□□□□ 0.99
CHGA-206ENST00000556876 ENTPD3O75355 529 aa21.26■□□□□ 0.99
CHGA-206ENST00000556876 HOXD10P28358 340 aa21.26■□□□□ 0.99
CHGA-206ENST00000556876 SLC9C1Q4G0N8 1177 aa21.26■□□□□ 0.99
CHGA-206ENST00000556876 NOL9Q5SY16 702 aaKnown RBP21.26■□□□□ 0.99
CHGA-206ENST00000556876 ANKRD23Q86SG2 305 aa21.26■□□□□ 0.99
CHGA-206ENST00000556876 BTBD19C9JJ37 291 aa21.25■□□□□ 0.99
CHGA-206ENST00000556876 MAP4K4O95819 1239 aaPredicted RBP21.25■□□□□ 0.99
CHGA-206ENST00000556876 PRDX5P30044 214 aa21.25■□□□□ 0.99
CHGA-206ENST00000556876 RARSP54136 660 aaKnown RBP21.25■□□□□ 0.99
CHGA-206ENST00000556876 MVPQ14764 893 aaKnown RBP21.25■□□□□ 0.99
CHGA-206ENST00000556876 CCDC102BQ68D86 513 aa21.25■□□□□ 0.99
CHGA-206ENST00000556876 MIGA2Q7L4E1 593 aa21.25■□□□□ 0.99
CHGA-206ENST00000556876 FAM163AQ96GL9 167 aaPredicted RBP21.25■□□□□ 0.99
CHGA-206ENST00000556876 IDI2Q9BXS1 227 aa21.25■□□□□ 0.99
CHGA-206ENST00000556876 LAMB1P07942 1786 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 CXCL11O14625 94 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 TCP10Q12799 353 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 MTX1Q13505 466 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 DIXDC1Q155Q3 683 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 DZIP1Q86YF9 867 aaKnown RBP21.24■□□□□ 0.99
CHGA-206ENST00000556876 KCNH4Q9UQ05 1017 aa21.24■□□□□ 0.99
CHGA-206ENST00000556876 PHKA1P46020 1223 aa21.23■□□□□ 0.99
CHGA-206ENST00000556876 LACTBP83111 547 aaPredicted RBP21.23■□□□□ 0.99
CHGA-206ENST00000556876 ZNF333Q96JL9 665 aa21.23■□□□□ 0.99
CHGA-206ENST00000556876 HTTP42858 3142 aa21.22■□□□□ 0.99
CHGA-206ENST00000556876 SRGAP3O43295 1099 aa21.22■□□□□ 0.99
CHGA-206ENST00000556876 FASTKD5Q7L8L6 764 aaKnown RBP21.22■□□□□ 0.99
CHGA-206ENST00000556876 PICK1Q9NRD5 415 aa21.22■□□□□ 0.99
CHGA-206ENST00000556876 INPP5BP32019 993 aa21.21■□□□□ 0.99
CHGA-206ENST00000556876 GSTO1P78417 241 aa21.21■□□□□ 0.99
CHGA-206ENST00000556876 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
CHGA-206ENST00000556876 MEIS3Q99687 375 aa21.21■□□□□ 0.99
CHGA-206ENST00000556876 FAM198AQ9UFP1 575 aa21.21■□□□□ 0.99
CHGA-206ENST00000556876 GAKO14976 1311 aa21.21■□□□□ 0.99
CHGA-206ENST00000556876 POTEFA5A3E0 1075 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 PDHXO00330 501 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
CHGA-206ENST00000556876 LDHCP07864 332 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 NFIAQ12857 509 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 C17orf99Q6UX52 265 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 PARK7Q99497 189 aaKnown RBP21.2■□□□□ 0.98
CHGA-206ENST00000556876 ABCF2Q9UG63 623 aa21.2■□□□□ 0.98
CHGA-206ENST00000556876 PA2G4Q9UQ80 394 aaKnown RBP21.2■□□□□ 0.98
CHGA-206ENST00000556876 A0A1B0GUL7 405 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 GNAI2P04899 355 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 TIMM10P62072 90 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 MAP3K10Q02779 954 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 SLC4A8Q2Y0W8 1093 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 GORABQ5T7V8 394 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 ZSCAN29Q8IWY8 852 aaPredicted RBP21.19■□□□□ 0.98
CHGA-206ENST00000556876 PTCH2Q9Y6C5 1203 aa21.19■□□□□ 0.98
CHGA-206ENST00000556876 IGSF3O75054 1194 aa21.18■□□□□ 0.98
CHGA-206ENST00000556876 RGS3P49796 1198 aa21.18■□□□□ 0.98
CHGA-206ENST00000556876 RASGRF1Q13972 1273 aa21.18■□□□□ 0.98
CHGA-206ENST00000556876 SCYL3Q8IZE3 742 aa21.18■□□□□ 0.98
CHGA-206ENST00000556876 XAGE2Q96GT9 111 aa21.18■□□□□ 0.98
CHGA-206ENST00000556876 CTNND1O60716 968 aaKnown RBP21.17■□□□□ 0.98
CHGA-206ENST00000556876 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHGA-206ENST00000556876 ATF7IPQ6VMQ6 1270 aa21.17■□□□□ 0.98
CHGA-206ENST00000556876 SLC45A1Q9Y2W3 748 aa21.17■□□□□ 0.98
CHGA-206ENST00000556876 TBC1D12O60347 775 aa21.16■□□□□ 0.98
CHGA-206ENST00000556876 CAPN2P17655 700 aa21.16■□□□□ 0.98
CHGA-206ENST00000556876 ADORA1P30542 326 aa21.16■□□□□ 0.98
CHGA-206ENST00000556876 PSMC4P43686 418 aa21.16■□□□□ 0.98
CHGA-206ENST00000556876 TFCP2Q12800 502 aa21.16■□□□□ 0.98
CHGA-206ENST00000556876 NKX2-3Q8TAU0 364 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms