RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 ABCF2Q9UG63 623 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 CSADQ9Y600 493 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 UQCRFS1P1P0C7P4 283 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 USP40Q9NVE5 1235 aa13.29□□□□□ -0.28
XRCC3-216ENST00000556682 DGKZQ13574 1117 aa13.28□□□□□ -0.28
XRCC3-216ENST00000556682 CDC42EP5Q6NZY7 148 aa13.28□□□□□ -0.28
XRCC3-216ENST00000556682 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
XRCC3-216ENST00000556682 FAM151AQ8WW52 585 aa13.28□□□□□ -0.28
XRCC3-216ENST00000556682 SSC5DA1L4H1 1573 aa13.28□□□□□ -0.28
XRCC3-216ENST00000556682 LDHCP07864 332 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 GSTO1P78417 241 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
XRCC3-216ENST00000556682 SPATA5Q8NB90 893 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
XRCC3-216ENST00000556682 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
XRCC3-216ENST00000556682 MCOLN1Q9GZU1 580 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 ELP3Q9H9T3 547 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 NOP58Q9Y2X3 529 aaKnown RBP13.27□□□□□ -0.29
XRCC3-216ENST00000556682 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
XRCC3-216ENST00000556682 TBC1D8O95759 1140 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 ARID4AP29374 1257 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 TCP10Q12799 353 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 RPAP1Q9BWH6 1393 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 CFHR5Q9BXR6 569 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 ZNF341Q9BYN7 854 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 HMG20BQ9P0W2 317 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
XRCC3-216ENST00000556682 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
XRCC3-216ENST00000556682 GAKO14976 1311 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 GPR25O00155 361 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 HMMRO75330 724 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
XRCC3-216ENST00000556682 GTF2A2P52657 109 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 VGLL4Q14135 290 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
XRCC3-216ENST00000556682 WRNIP1Q96S55 665 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
XRCC3-216ENST00000556682 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 IGSF3O75054 1194 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 FKTNO75072 461 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 ENTPD3O75355 529 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
XRCC3-216ENST00000556682 MECOMQ03112 1051 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 NFIAQ12857 509 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 MIGA2Q7L4E1 593 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
XRCC3-216ENST00000556682 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
XRCC3-216ENST00000556682 NOL10Q9BSC4 688 aaKnown RBP13.24□□□□□ -0.29
XRCC3-216ENST00000556682 MROH7-TTC4A0A0A0MT08 1334 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 GPR75-ASB3A0A0A6YYF3 556 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 GJA5P36382 358 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 MCAMP43121 646 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 BTDP43251 543 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 RGS3P49796 1198 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 TBC1D9Q6ZT07 1266 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 ZNF512BQ96KM6 892 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-216ENST00000556682 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 AKAP11Q9UKA4 1901 aa13.23□□□□□ -0.29
XRCC3-216ENST00000556682 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 BAG3O95817 575 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 CCL15Q16663 113 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
XRCC3-216ENST00000556682 NSUN4Q96CB9 384 aaKnown RBP13.22□□□□□ -0.29
XRCC3-216ENST00000556682 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
XRCC3-216ENST00000556682 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms